1. Home
  2. Species
  3. Salvinia molesta
  4. Sequence
  5. Sam_g12210

Sam_g12210


Description : not classified & original description: none


Gene families : OG0002590 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002590_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g12210
Cluster HCCA: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00080930 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Adi_g066475 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0021.g015791 No alias not classified & original description: CDS=235-1401 0.02 OrthoFinder output from all 47 species
GSVIVT01010745001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os04g41500.2 LOC_Os04g41500 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Pnu_g26973 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g05405 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g46177 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003997 acyl-CoA oxidase activity IEP HCCA
CC GO:0005777 peroxisome IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006635 fatty acid beta-oxidation IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009062 fatty acid catabolic process IEP HCCA
BP GO:0016042 lipid catabolic process IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP HCCA
BP GO:0019395 fatty acid oxidation IEP HCCA
BP GO:0030258 lipid modification IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0034440 lipid oxidation IEP HCCA
CC GO:0042579 microbody IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044242 cellular lipid catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
BP GO:0072329 monocarboxylic acid catabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!