Sam_g11857


Description : not classified & original description: none


Gene families : OG0000255 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000255_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g11857

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00023650 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Aev_g01733 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g11765 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g13721 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g10067 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15965 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g40019 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene01455.t1 Aspi01Gene01455 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0007.g010670 No alias not classified & original description: CDS=1-2310 0.03 OrthoFinder output from all 47 species
Azfi_s0027.g023718 No alias not classified & original description: CDS=66-2393 0.03 OrthoFinder output from all 47 species
Azfi_s0288.g063236 No alias not classified & original description: CDS=1-2007 0.03 OrthoFinder output from all 47 species
Cba_g02654 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g04006 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g15496 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g22569 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g05585 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08926 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03975 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04806 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os03g28310.1 LOC_Os03g28310 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g23759 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10434613g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp1g27530.1 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Msp_g25499 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g06588 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g10923 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12608 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g29355 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc05g040050.3.1 Solyc05g040050 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc08g005300.3.1 Solyc08g005300 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc08g029220.3.1 Solyc08g029220 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g06089 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g21993 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g43751 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e017660_P001 Zm00001e017660 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e036676_P001 Zm00001e036676 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 67 128
IPR024593 DUF3444 596 793
No external refs found!