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  5. Sam_g11708

Sam_g11708


Description : rhamnogalacturonan-I O-acetyltransferase *(TBL) & original description: none


Gene families : OG0000038 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g11708

Target Alias Description ECC score Gene Family Method Actions
Adi_g057518 TBL25 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g11670 TBL21 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.16G007600.1 TBL26, Ceric.16G007600 not classified & original description: pacid=50589176... 0.03 OrthoFinder output from all 47 species
Ceric.27G011100.1 TBL13, Ceric.27G011100 not classified & original description: pacid=50604886... 0.02 OrthoFinder output from all 47 species
GSVIVT01024714001 PMR5, TBL44 Protein PMR5 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os04g39130.1 TBL22, LOC_Os04g39130 Protein ALTERED XYLOGLUCAN 4-like OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os06g10560.1 TBR, LOC_Os06g10560 Protein trichome birefringence-like 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os12g01380.1 ESK1, TBL29,... xylan O-acetyltransferase (XOAT) 0.02 OrthoFinder output from all 47 species
MA_31151g0010 TBL1 xylan O-acetyltransferase (XOAT) 0.03 OrthoFinder output from all 47 species
MA_50166g0010 TBR Protein trichome birefringence-like 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp2g11180.1 TBL11 rhamnogalacturonan-I O-acetyltransferase (TBL) 0.02 OrthoFinder output from all 47 species
Nbi_g22787 TBL16 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g17894 TBL5 polysaccharide O-acetyltransferase *(TBR) & original... 0.02 OrthoFinder output from all 47 species
Ppi_g55279 TBL21 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc12g014360.2.1 TBL41, Solyc12g014360 Protein trichome birefringence-like 41 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Spa_g07493 TBL1 polysaccharide O-acetyltransferase *(TBR) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e009759_P001 TBL27, Zm00001e009759 xyloglucan O-acetyltransferase (AXY4) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016740 transferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004594 pantothenate kinase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
BP GO:0015936 coenzyme A metabolic process IEP HCCA
BP GO:0015937 coenzyme A biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033866 nucleoside bisphosphate biosynthetic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034030 ribonucleoside bisphosphate biosynthetic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034033 purine nucleoside bisphosphate biosynthetic process IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR025846 TBL_N 214 267
IPR026057 PC-Esterase 268 563
No external refs found!