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  5. Sam_g11067

Sam_g11067


Description : clade F phosphatase & original description: none


Gene families : OG0000682 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000682_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g11067

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0212.g058177 No alias clade F phosphatase & original description: CDS=1-951 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020746.3 WIN2 Probable protein phosphatase 2C 71 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Len_g04190 No alias clade F phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0027.g009643 WIN2 clade F phosphatase & original description: CDS=131-997 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012076 WIN2 clade F phosphatase & original description: CDS=97-936 0.02 OrthoFinder output from all 47 species
Zm00001e014290_P004 Zm00001e014290 Probable protein phosphatase 2C member 13, mitochondrial... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0045927 positive regulation of growth IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase-like_dom 26 264
No external refs found!