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  5. Sam_g07861

Sam_g07861


Description : accessory protein *(PlCALM3) & original description: none


Gene families : OG0000273 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000273_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g07861

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00161520 evm_27.TU.AmTr_v1... Vesicle trafficking.clathrin coated vesicle (CCV)... 0.01 OrthoFinder output from all 47 species
AT5G35200 No alias ENTH/ANTH/VHS superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g015730 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g055261 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g087890 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g03266 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g62368 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g02242 No alias accessory protein *(PlCALM3) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g08469 No alias accessory protein *(PlCALM3) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.06G031300.1 Ceric.06G031300 not classified & original description: pacid=50619961... 0.05 OrthoFinder output from all 47 species
Cre09.g393136 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.02 OrthoFinder output from all 47 species
Dac_g10551 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g43641 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_24032 No alias ECA1/2 clathrin coated vesicle adaptor protein 0.02 OrthoFinder output from all 47 species
LOC_Os02g55970.1 LOC_Os02g55970 Putative clathrin assembly protein At5g35200... 0.03 OrthoFinder output from all 47 species
LOC_Os03g16800.1 LOC_Os03g16800 component CAP1/ECA4 of TPLATE AP-2 co-adaptor complex 0.03 OrthoFinder output from all 47 species
LOC_Os06g48630.1 LOC_Os06g48630 ECA1/2 clathrin coated vesicle adaptor protein 0.01 OrthoFinder output from all 47 species
MA_89795g0010 No alias Putative clathrin assembly protein At1g14910... 0.02 OrthoFinder output from all 47 species
Mp2g22330.1 No alias ECA1/2 clathrin coated vesicle adaptor protein 0.05 OrthoFinder output from all 47 species
Mp3g16270.1 No alias Putative clathrin assembly protein At2g25430... 0.02 OrthoFinder output from all 47 species
Nbi_g33181 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09579 No alias accessory protein *(PlCALM3) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g16774 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0133.g022248 No alias not classified & original description: CDS=1-1188 0.02 OrthoFinder output from all 47 species
Sam_g25747 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g49233 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo440070 No alias Putative clathrin assembly protein At4g02650... 0.02 OrthoFinder output from all 47 species
Solyc07g007820.3.1 Solyc07g007820 Putative clathrin assembly protein At5g35200... 0.04 OrthoFinder output from all 47 species
Solyc12g006000.1.1 Solyc12g006000 clathrin assembly protein (AP180) 0.02 OrthoFinder output from all 47 species
Tin_g07524 No alias accessory protein *(PlCALM3) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e023668_P001 Zm00001e023668 Putative clathrin assembly protein At5g35200... 0.02 OrthoFinder output from all 47 species
Zm00001e028613_P001 Zm00001e028613 Putative clathrin assembly protein At1g03050... 0.01 OrthoFinder output from all 47 species
Zm00001e029642_P001 Zm00001e029642 Putative clathrin assembly protein At2g25430... 0.02 OrthoFinder output from all 47 species
Zm00001e032313_P001 Zm00001e032313 ECA1/2 clathrin coated vesicle adaptor protein 0.02 OrthoFinder output from all 47 species
Zm00001e038481_P001 Zm00001e038481 component CAP1/ECA4 of TPLATE AP-2 co-adaptor complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004014 adenosylmethionine decarboxylase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006595 polyamine metabolic process IEP HCCA
BP GO:0006596 polyamine biosynthetic process IEP HCCA
BP GO:0006597 spermine biosynthetic process IEP HCCA
BP GO:0008215 spermine metabolic process IEP HCCA
BP GO:0008216 spermidine metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0008295 spermidine biosynthetic process IEP HCCA
MF GO:0008417 fucosyltransferase activity IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009309 amine biosynthetic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0042401 biogenic amine biosynthetic process IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR011417 ANTH_dom 34 302
No external refs found!