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  5. Sam_g06416

Sam_g06416


Description : EC_3.2 glycosylase & original description: none


Gene families : OG0000574 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000574_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g06416
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
Dcu_g06201 AGAL2, AtAGAL2 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26801 AGAL2, AtAGAL2 EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01006484001 AGAL2, AtAGAL2 Alpha-galactosidase 2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_04687 AGAL2, AtAGAL2 Alpha-galactosidase 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_08854 AGAL2, AtAGAL2 Alpha-galactosidase OS=Coffea arabica... 0.02 OrthoFinder output from all 47 species
Lfl_g17286 AGAL2, AtAGAL2 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g16192 AGAL1, AtAGAL1 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g42241 AGAL1, AtAGAL1 EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g31913 AGAL2, AtAGAL2 EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g27056 AGAL2, AtAGAL2 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g27723 AGAL1, AtAGAL1 EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g29316 AGAL2, AtAGAL2 alpha-galactosidase *(AGAL) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005261 monoatomic cation channel activity IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
MF GO:0015252 proton channel activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR041233 Melibiase_C 325 398
IPR002241 Glyco_hydro_27 44 308
No external refs found!