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  5. Sam_g02071

Sam_g02071


Description : not classified & original description: none


Gene families : OG0004681 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004681_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g02071

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene64014.t1 Aspi01Gene64014 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0912.g092374 No alias not classified & original description: CDS=106-1278 0.02 OrthoFinder output from all 47 species
Dde_g18793 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os08g45180.1 LOC_Os08g45180 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Pp3c16_16280V3.1 Pp3c16_16280 pfkB-like carbohydrate kinase family protein 0.01 OrthoFinder output from all 47 species
Sam_g37812 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc09g064240.3.1 Solyc09g064240 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g38781 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004109 coproporphyrinogen oxidase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR011611 PfkB_dom 308 364
IPR011611 PfkB_dom 24 245
No external refs found!