Sam_g00493

Description : not classified & original description: none

Gene families : OG0001858 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001858_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g00493
Cluster	HCCA: Cluster_14

Target	Alias	Description	ECC score	Gene Family Method
AT1G67940	AtSTAR1, NAP3, ATNAP3	non-intrinsic ABC protein 3	0.02	OrthoFinder output from all 47 species
Ala_g05731	AtSTAR1, NAP3, ATNAP3	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g11091	AtSTAR1, NAP3, ATNAP3	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0006.g010332	AtSTAR1, NAP3, ATNAP3	not classified & original description: CDS=1-915	0.03	OrthoFinder output from all 47 species
Ceric.12G018400.1	AtSTAR1, NAP3,...	not classified & original description: pacid=50602085...	0.03	OrthoFinder output from all 47 species
MA_570941g0010	AtSTAR1, NAP3, ATNAP3	ABC transporter I family member 17 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Pnu_g02028	AtSTAR1, NAP3, ATNAP3	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Pnu_g21358	AtSTAR1, NAP3, ATNAP3	not classified & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	HCCA
MF	GO:0004089	carbonate dehydratase activity	IEP	HCCA
MF	GO:0005215	transporter activity	IEP	HCCA
CC	GO:0005575	cellular_component	IEP	HCCA
BP	GO:0006810	transport	IEP	HCCA
BP	GO:0006811	monoatomic ion transport	IEP	HCCA
BP	GO:0006812	monoatomic cation transport	IEP	HCCA
BP	GO:0008150	biological_process	IEP	HCCA
MF	GO:0008324	monoatomic cation transmembrane transporter activity	IEP	HCCA
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
MF	GO:0016829	lyase activity	IEP	HCCA
MF	GO:0016835	carbon-oxygen lyase activity	IEP	HCCA
MF	GO:0016836	hydro-lyase activity	IEP	HCCA
MF	GO:0022857	transmembrane transporter activity	IEP	HCCA
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	HCCA
BP	GO:0030001	metal ion transport	IEP	HCCA
MF	GO:0043565	sequence-specific DNA binding	IEP	HCCA
MF	GO:0046873	metal ion transmembrane transporter activity	IEP	HCCA
BP	GO:0051179	localization	IEP	HCCA
BP	GO:0051234	establishment of localization	IEP	HCCA
BP	GO:0055085	transmembrane transport	IEP	HCCA
CC	GO:0110165	cellular anatomical entity	IEP	HCCA
MF	GO:0140110	transcription regulator activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	120	263

External Links

No external refs found!