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  5. Aob_g42924

Aob_g42924


Description : not classified & original description: none


Gene families : OG0001451 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001451_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g42924

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00207790 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G03830 No alias guanylate-binding family protein 0.04 OrthoFinder output from all 47 species
Als_g23877 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g00802 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene07186.t1 Aspi01Gene07186 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene29718.t1 Aspi01Gene29718 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene69157.t1 Aspi01Gene69157 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0185.g056605 No alias not classified & original description: CDS=339-3572 0.02 OrthoFinder output from all 47 species
Cba_g20738 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000955.23 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre08.g384200 No alias No description available 0.01 OrthoFinder output from all 47 species
Ehy_g18712 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g21782 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_30025g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g06798 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g43652 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g09147 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0216.g026042 No alias not classified & original description: CDS=152-2950 0.02 OrthoFinder output from all 47 species
Sam_g51397 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g077600.3.1 Solyc02g077600 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e032422_P001 Zm00001e032422 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003917 DNA topoisomerase type I (single strand cut, ATP-independent) activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003191 Guanylate-bd/ATL_C 306 609
IPR015894 Guanylate-bd_N 44 302
No external refs found!