1. Home
  2. Species
  3. Abrodictyum obscurum
  4. Sequence
  5. Aob_g31629

Aob_g31629


Description : CORVET-specific component *(VPS8) of HOPS/CORVET membrane tethering complexes & original description: none


Gene families : OG0004817 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004817_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g31629

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00100p00112150 evm_27.TU.AmTr_v1... Vesicle trafficking.target membrane... 0.05 OrthoFinder output from all 47 species
AT4G00800 No alias transducin family protein / WD-40 repeat family protein 0.1 OrthoFinder output from all 47 species
Aev_g14975 No alias CORVET-specific component *(VPS8) of HOPS/CORVET... 0.04 OrthoFinder output from all 47 species
Ala_g12813 No alias CORVET-specific component *(VPS8) of HOPS/CORVET... 0.03 OrthoFinder output from all 47 species
Als_g32080 No alias CORVET-specific component *(VPS8) of HOPS/CORVET... 0.05 OrthoFinder output from all 47 species
Aspi01Gene38237.t1 Aspi01Gene38237 CORVET-specific component *(VPS8) of HOPS/CORVET... 0.03 OrthoFinder output from all 47 species
Azfi_s0580.g078297 No alias CORVET-specific component *(VPS8) of HOPS/CORVET... 0.03 OrthoFinder output from all 47 species
Ceric.08G032600.1 Ceric.08G032600 CORVET-specific component *(VPS8) of HOPS/CORVET... 0.04 OrthoFinder output from all 47 species
Cre13.g606350 No alias No description available 0.02 OrthoFinder output from all 47 species
Dac_g10816 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g33746 No alias CORVET-specific component *(VPS8) of HOPS/CORVET... 0.02 OrthoFinder output from all 47 species
Dcu_g04151 No alias CORVET-specific component *(VPS8) of HOPS/CORVET... 0.04 OrthoFinder output from all 47 species
Ehy_g19649 No alias CORVET-specific component *(VPS8) of HOPS/CORVET... 0.04 OrthoFinder output from all 47 species
GSVIVT01027438001 No alias Vesicle trafficking.target membrane... 0.03 OrthoFinder output from all 47 species
Gb_27586 No alias CORVET-specific component VPS8 of HOPS/CORVET membrane... 0.05 OrthoFinder output from all 47 species
LOC_Os02g03220.1 LOC_Os02g03220 CORVET-specific component VPS8 of HOPS/CORVET membrane... 0.05 OrthoFinder output from all 47 species
Len_g19136 No alias CORVET-specific component *(VPS8) of HOPS/CORVET... 0.04 OrthoFinder output from all 47 species
Lfl_g29102 No alias CORVET-specific component *(VPS8) of HOPS/CORVET... 0.04 OrthoFinder output from all 47 species
MA_10428293g0010 No alias CORVET-specific component VPS8 of HOPS/CORVET membrane... 0.02 OrthoFinder output from all 47 species
Mp8g08230.1 No alias CORVET-specific component VPS8 of HOPS/CORVET membrane... 0.03 OrthoFinder output from all 47 species
Msp_g27241 No alias CORVET-specific component *(VPS8) of HOPS/CORVET... 0.04 OrthoFinder output from all 47 species
Ore_g33232 No alias CORVET-specific component *(VPS8) of HOPS/CORVET... 0.03 OrthoFinder output from all 47 species
Pnu_g27074 No alias CORVET-specific component *(VPS8) of HOPS/CORVET... 0.04 OrthoFinder output from all 47 species
Ppi_g45359 No alias CORVET-specific component *(VPS8) of HOPS/CORVET... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0195.g025456 No alias CORVET-specific component *(VPS8) of HOPS/CORVET... 0.03 OrthoFinder output from all 47 species
Sam_g11618 No alias CORVET-specific component *(VPS8) of HOPS/CORVET... 0.04 OrthoFinder output from all 47 species
Smo441252 No alias Vesicle trafficking.target membrane... 0.03 OrthoFinder output from all 47 species
Solyc05g044610.3.1 Solyc05g044610 CORVET-specific component VPS8 of HOPS/CORVET membrane... 0.06 OrthoFinder output from all 47 species
Zm00001e013515_P001 Zm00001e013515 CORVET-specific component VPS8 of HOPS/CORVET membrane... 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006606 protein import into nucleus IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032012 regulation of ARF protein signal transduction IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034504 protein localization to nucleus IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0046578 regulation of Ras protein signal transduction IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051170 import into nucleus IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000547 Clathrin_H-chain/VPS_repeat 1631 1699
IPR025941 Vps8_central_dom 1115 1301
No external refs found!