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  5. Aob_g30231

Aob_g30231


Description : not classified & original description: none


Gene families : OG0009105 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009105_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g30231

Target Alias Description ECC score Gene Family Method Actions
AT3G15240 No alias No description available 0.02 OrthoFinder output from all 47 species
Ala_g27621 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g40136 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g43785 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0002.g001235 No alias not classified & original description: CDS=346-2175 0.03 OrthoFinder output from all 47 species
Ceric.19G034400.1 Ceric.19G034400 not classified & original description: pacid=50575541... 0.04 OrthoFinder output from all 47 species
Dcu_g32168 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os11g25920.1 LOC_Os11g25920 Protein RICE SALT SENSITIVE 3 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Ppi_g32569 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g38442 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e019565_P001 Zm00001e019565 Protein RICE SALT SENSITIVE 3 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR025610 MYC/MYB_N 16 211
No external refs found!