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  5. Aob_g17929

Aob_g17929


Description : not classified & original description: none


Gene families : OG0000085 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000085_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g17929
Cluster HCCA: Cluster_162

Target Alias Description ECC score Gene Family Method Actions
Adi_g007222 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g086088 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g086089 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g104495 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g110934 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g113900 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g05521 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g06670 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g04358 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06393 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene14008.t1 Aspi01Gene14008 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene27180.t1 Aspi01Gene27180 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G053300.1 Ceric.01G053300 not classified & original description: pacid=50592097... 0.03 OrthoFinder output from all 47 species
Dcu_g11362 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02510 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g05604 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19156 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os06g12260.1 LOC_Os06g12260 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g10339 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g04787 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g11033 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g11828 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_15917g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g14630 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g09602 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20402 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25333 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g13336 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09343 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g04772 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g05292 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g29448 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g38709 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g47097 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g52159 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08253 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g14477 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g34473 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR013989 Dev_and_cell_death_domain 174 301
No external refs found!