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  5. Aob_g11675

Aob_g11675 (APE1)


Aliases : APE1

Description : photosynthetic acclimation APE acclimation factor & original description: none


Gene families : OG0005042 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005042_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g11675
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
AT5G38660 APE1 acclimation of photosynthesis to environment 0.08 OrthoFinder output from all 47 species
Adi_g042602 APE1 photosynthetic acclimation APE acclimation factor &... 0.03 OrthoFinder output from all 47 species
Aev_g05820 APE1 photosynthetic acclimation APE acclimation factor &... 0.11 OrthoFinder output from all 47 species
Ala_g01434 APE1 photosynthetic acclimation APE acclimation factor &... 0.06 OrthoFinder output from all 47 species
Als_g04161 APE1 photosynthetic acclimation APE acclimation factor &... 0.1 OrthoFinder output from all 47 species
Aop_g00474 APE1 photosynthetic acclimation APE acclimation factor &... 0.07 OrthoFinder output from all 47 species
Aspi01Gene37157.t1 APE1, Aspi01Gene37157 photosynthetic acclimation APE acclimation factor &... 0.05 OrthoFinder output from all 47 species
Cba_g36758 APE1 photosynthetic acclimation APE acclimation factor &... 0.05 OrthoFinder output from all 47 species
Ceric.36G020000.1 APE1, Ceric.36G020000 photosynthetic acclimation APE acclimation factor &... 0.07 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000241.155 APE1 Photosynthesis.photophosphorylation.photosystem... 0.03 OrthoFinder output from all 47 species
Cre16.g665250 APE1 Photosynthesis.photophosphorylation.photosystem... 0.03 OrthoFinder output from all 47 species
Dac_g08395 APE1 photosynthetic acclimation APE acclimation factor &... 0.02 OrthoFinder output from all 47 species
Dcu_g15090 APE1 photosynthetic acclimation APE acclimation factor &... 0.11 OrthoFinder output from all 47 species
Dde_g12570 APE1 photosynthetic acclimation APE acclimation factor &... 0.04 OrthoFinder output from all 47 species
Ehy_g07374 APE1 photosynthetic acclimation APE acclimation factor &... 0.02 OrthoFinder output from all 47 species
GSVIVT01036442001 APE1 Photosynthesis.photophosphorylation.photosystem... 0.07 OrthoFinder output from all 47 species
Gb_11215 APE1 photosynthetic acclimation APE acclimation factor 0.07 OrthoFinder output from all 47 species
LOC_Os08g27010.1 APE1, LOC_Os08g27010 photosynthetic acclimation APE acclimation factor 0.06 OrthoFinder output from all 47 species
Len_g00377 APE1 photosynthetic acclimation APE acclimation factor &... 0.05 OrthoFinder output from all 47 species
Lfl_g00668 APE1 photosynthetic acclimation APE acclimation factor &... 0.07 OrthoFinder output from all 47 species
Mp1g12820.1 APE1 photosynthetic acclimation APE acclimation factor 0.1 OrthoFinder output from all 47 species
Msp_g00353 APE1 photosynthetic acclimation APE acclimation factor &... 0.09 OrthoFinder output from all 47 species
Nbi_g30376 APE1 photosynthetic acclimation APE acclimation factor &... 0.12 OrthoFinder output from all 47 species
Ore_g17711 APE1 photosynthetic acclimation APE acclimation factor &... 0.1 OrthoFinder output from all 47 species
Pir_g12433 APE1 photosynthetic acclimation APE acclimation factor &... 0.06 OrthoFinder output from all 47 species
Pir_g59760 APE1 photosynthetic acclimation APE acclimation factor &... 0.04 OrthoFinder output from all 47 species
Pnu_g12820 APE1 photosynthetic acclimation APE acclimation factor &... 0.03 OrthoFinder output from all 47 species
Pp3c4_3720V3.1 APE1, Pp3c4_3720 acclimation of photosynthesis to environment 0.01 OrthoFinder output from all 47 species
Ppi_g32168 APE1 photosynthetic acclimation APE acclimation factor &... 0.08 OrthoFinder output from all 47 species
Sacu_v1.1_s0071.g016876 APE1 photosynthetic acclimation APE acclimation factor &... 0.03 OrthoFinder output from all 47 species
Sam_g16456 No alias photosynthetic acclimation APE acclimation factor &... 0.06 OrthoFinder output from all 47 species
Smo117112 APE1 Photosynthesis.photophosphorylation.photosystem... 0.06 OrthoFinder output from all 47 species
Solyc03g034170.4.1 APE1, Solyc03g034170 photosynthetic acclimation APE acclimation factor 0.07 OrthoFinder output from all 47 species
Spa_g11785 APE1 photosynthetic acclimation APE acclimation factor &... 0.07 OrthoFinder output from all 47 species
Tin_g12102 APE1 photosynthetic acclimation APE acclimation factor &... 0.06 OrthoFinder output from all 47 species
Zm00001e004293_P003 APE1, Zm00001e004293 photosynthetic acclimation APE acclimation factor 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004096 catalase activity IEP HCCA
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP HCCA
MF GO:0004332 fructose-bisphosphate aldolase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
BP GO:0006729 tetrahydrobiopterin biosynthetic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
MF GO:0008124 4-alpha-hydroxytetrahydrobiopterin dehydratase activity IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
MF GO:0008685 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016411 acylglycerol O-acyltransferase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0016849 phosphorus-oxygen lyase activity IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0034311 diol metabolic process IEP HCCA
BP GO:0034312 diol biosynthetic process IEP HCCA
BP GO:0042558 pteridine-containing compound metabolic process IEP HCCA
BP GO:0042559 pteridine-containing compound biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046146 tetrahydrobiopterin metabolic process IEP HCCA
BP GO:0046165 alcohol biosynthetic process IEP HCCA
BP GO:0046173 polyol biosynthetic process IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0110102 ribulose bisphosphate carboxylase complex assembly IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR021275 DUF2854 95 245
No external refs found!