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  5. Aob_g08924

Aob_g08924 (PSB29, THF1)


Aliases : PSB29, THF1

Description : regulatory protein *(THF1) of thylakoid biogenesis & original description: none


Gene families : OG0005582 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005582_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g08924
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AT2G20890 PSB29, THF1 photosystem II reaction center PSB29 protein 0.06 OrthoFinder output from all 47 species
Adi_g049478 PSB29, THF1 regulatory protein *(THF1) of thylakoid biogenesis &... 0.04 OrthoFinder output from all 47 species
Aev_g07010 PSB29, THF1 regulatory protein *(THF1) of thylakoid biogenesis &... 0.05 OrthoFinder output from all 47 species
Aev_g41933 PSB29, THF1 regulatory protein *(THF1) of thylakoid biogenesis &... 0.02 OrthoFinder output from all 47 species
Ala_g10607 PSB29, THF1 regulatory protein *(THF1) of thylakoid biogenesis &... 0.03 OrthoFinder output from all 47 species
Als_g10332 PSB29, THF1 regulatory protein *(THF1) of thylakoid biogenesis &... 0.06 OrthoFinder output from all 47 species
Aop_g10796 PSB29, THF1 regulatory protein *(THF1) of thylakoid biogenesis &... 0.07 OrthoFinder output from all 47 species
Aspi01Gene22706.t1 PSB29, THF1,... regulatory protein *(THF1) of thylakoid bioGenesis &... 0.03 OrthoFinder output from all 47 species
Azfi_s0018.g014961 PSB29, THF1 regulatory protein *(THF1) of thylakoid biogenesis &... 0.04 OrthoFinder output from all 47 species
Cba_g15645 PSB29, THF1 regulatory protein *(THF1) of thylakoid biogenesis &... 0.03 OrthoFinder output from all 47 species
Ceric.09G053600.1 PSB29, THF1,... regulatory protein *(THF1) of thylakoid biogenesis &... 0.07 OrthoFinder output from all 47 species
Ceric.33G011500.1 PSB29, THF1,... regulatory protein *(THF1) of thylakoid biogenesis &... 0.04 OrthoFinder output from all 47 species
Cre13.g562850 PSB29, THF1 Photosynthesis.photophosphorylation.photosystem... 0.02 OrthoFinder output from all 47 species
Dac_g11041 PSB29, THF1 regulatory protein *(THF1) of thylakoid biogenesis &... 0.02 OrthoFinder output from all 47 species
Dcu_g05354 PSB29, THF1 regulatory protein *(THF1) of thylakoid biogenesis &... 0.02 OrthoFinder output from all 47 species
Dde_g05773 PSB29, THF1 regulatory protein *(THF1) of thylakoid biogenesis &... 0.07 OrthoFinder output from all 47 species
Ehy_g09593 PSB29, THF1 regulatory protein *(THF1) of thylakoid biogenesis &... 0.02 OrthoFinder output from all 47 species
Ehy_g18167 PSB29, THF1 regulatory protein *(THF1) of thylakoid biogenesis &... 0.05 OrthoFinder output from all 47 species
GSVIVT01029990001 PSB29, THF1 Photosynthesis.photophosphorylation.photosystem... 0.03 OrthoFinder output from all 47 species
Len_g11639 PSB29, THF1 regulatory protein *(THF1) of thylakoid biogenesis &... 0.07 OrthoFinder output from all 47 species
Mp5g23000.1 PSB29, THF1 Psb29 protein involved in PS-II assembly 0.03 OrthoFinder output from all 47 species
Nbi_g04688 PSB29, THF1 regulatory protein *(THF1) of thylakoid biogenesis &... 0.06 OrthoFinder output from all 47 species
Ore_g05861 PSB29, THF1 regulatory protein *(THF1) of thylakoid biogenesis &... 0.03 OrthoFinder output from all 47 species
Pir_g02490 PSB29, THF1 regulatory protein *(THF1) of thylakoid biogenesis &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0242.g026645 PSB29, THF1 regulatory protein *(THF1) of thylakoid biogenesis &... 0.04 OrthoFinder output from all 47 species
Sam_g09897 No alias regulatory protein *(THF1) of thylakoid biogenesis &... 0.06 OrthoFinder output from all 47 species
Sam_g29483 No alias regulatory protein *(THF1) of thylakoid biogenesis &... 0.04 OrthoFinder output from all 47 species
Spa_g08315 PSB29, THF1 regulatory protein *(THF1) of thylakoid biogenesis &... 0.03 OrthoFinder output from all 47 species
Tin_g03106 PSB29, THF1 regulatory protein *(THF1) of thylakoid biogenesis &... 0.03 OrthoFinder output from all 47 species
Zm00001e035236_P001 PSB29, THF1,... Psb29 protein involved in PS-II assembly 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0010207 photosystem II assembly IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005261 monoatomic cation channel activity IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009536 plastid IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0010257 NADH dehydrogenase complex assembly IEP HCCA
BP GO:0010258 NADH dehydrogenase complex (plastoquinone) assembly IEP HCCA
BP GO:0010275 NAD(P)H dehydrogenase complex assembly IEP HCCA
MF GO:0015252 proton channel activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
BP GO:0015994 chlorophyll metabolic process IEP HCCA
BP GO:0015995 chlorophyll biosynthetic process IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0017006 protein-tetrapyrrole linkage IEP HCCA
BP GO:0017007 protein-bilin linkage IEP HCCA
BP GO:0017009 protein-phycocyanobilin linkage IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
BP GO:0046148 pigment biosynthetic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
MF GO:0046406 magnesium protoporphyrin IX methyltransferase activity IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR017499 Thf1 77 281
No external refs found!