- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : protein involved in PS-II assembly *(HCF244) & original description: none
Gene families : OG0005073 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005073_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Aob_g08922 | |
| Cluster | HCCA: Cluster_24 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT4G35250 | No alias | NAD(P)-binding Rossmann-fold superfamily protein | 0.1 | OrthoFinder output from all 47 species | |
| Aev_g20709 | No alias | protein involved in PS-II assembly *(HCF244) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g14214 | No alias | protein involved in PS-II assembly *(HCF244) & original... | 0.06 | OrthoFinder output from all 47 species | |
| Als_g01643 | No alias | protein involved in PS-II assembly *(HCF244) & original... | 0.07 | OrthoFinder output from all 47 species | |
| Aop_g02819 | No alias | protein involved in PS-II assembly *(HCF244) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene42667.t1 | Aspi01Gene42667 | protein involved in PS-II assembly *(HCF244) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0004.g008890 | No alias | protein involved in PS-II assembly *(HCF244) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g00840 | No alias | protein involved in PS-II assembly *(HCF244) & original... | 0.11 | OrthoFinder output from all 47 species | |
| Ceric.07G004000.1 | Ceric.07G004000 | protein involved in PS-II assembly *(HCF244) & original... | 0.09 | OrthoFinder output from all 47 species | |
| Cre02.g142146 | No alias | Photosynthesis.photophosphorylation.photosystem... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g03765 | No alias | protein involved in PS-II assembly *(HCF244) & original... | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g02684 | No alias | protein involved in PS-II assembly *(HCF244) & original... | 0.12 | OrthoFinder output from all 47 species | |
| Dde_g15071 | No alias | protein involved in PS-II assembly *(HCF244) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g32101 | No alias | protein involved in PS-II assembly *(HCF244) & original... | 0.07 | OrthoFinder output from all 47 species | |
| GSVIVT01023933001 | No alias | Photosynthesis.photophosphorylation.photosystem... | 0.08 | OrthoFinder output from all 47 species | |
| Gb_20261 | No alias | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os08g44000.1 | LOC_Os08g44000 | HCF244 protein involved in PS-II assembly | 0.06 | OrthoFinder output from all 47 species | |
| Len_g09839 | No alias | protein involved in PS-II assembly *(HCF244) & original... | 0.06 | OrthoFinder output from all 47 species | |
| Lfl_g02979 | No alias | protein involved in PS-II assembly *(HCF244) & original... | 0.05 | OrthoFinder output from all 47 species | |
| MA_10432153g0010 | No alias | no hits & (original description: none) | 0.08 | OrthoFinder output from all 47 species | |
| MA_10437102g0010 | No alias | HCF244 protein involved in PS-II assembly | 0.07 | OrthoFinder output from all 47 species | |
| Mp8g06810.1 | No alias | HCF244 protein involved in PS-II assembly | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g12418 | No alias | protein involved in PS-II assembly *(HCF244) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g12400 | No alias | protein involved in PS-II assembly *(HCF244) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g03288 | No alias | protein involved in PS-II assembly *(HCF244) & original... | 0.06 | OrthoFinder output from all 47 species | |
| Pir_g14964 | No alias | protein involved in PS-II assembly *(HCF244) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g06043 | No alias | protein involved in PS-II assembly *(HCF244) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g13694 | No alias | protein involved in PS-II assembly *(HCF244) & original... | 0.06 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0073.g017156 | No alias | protein involved in PS-II assembly *(HCF244) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g18478 | No alias | protein involved in PS-II assembly *(HCF244) & original... | 0.07 | OrthoFinder output from all 47 species | |
| Smo235693 | No alias | Photosynthesis.photophosphorylation.photosystem... | 0.06 | OrthoFinder output from all 47 species | |
| Solyc01g112060.4.1 | Solyc01g112060 | HCF244 protein involved in PS-II assembly | 0.11 | OrthoFinder output from all 47 species | |
| Spa_g11765 | No alias | protein involved in PS-II assembly *(HCF244) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g05090 | No alias | protein involved in PS-II assembly *(HCF244) & original... | 0.08 | OrthoFinder output from all 47 species | |
| Zm00001e003972_P002 | Zm00001e003972 | HCF244 protein involved in PS-II assembly | 0.06 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004089 | carbonate dehydratase activity | IEP | HCCA |
| MF | GO:0004109 | coproporphyrinogen oxidase activity | IEP | HCCA |
| MF | GO:0004375 | glycine dehydrogenase (decarboxylating) activity | IEP | HCCA |
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| BP | GO:0006082 | organic acid metabolic process | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006415 | translational termination | IEP | HCCA |
| BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
| BP | GO:0006544 | glycine metabolic process | IEP | HCCA |
| BP | GO:0006546 | glycine catabolic process | IEP | HCCA |
| BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006779 | porphyrin-containing compound biosynthetic process | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009063 | amino acid catabolic process | IEP | HCCA |
| BP | GO:0009069 | serine family amino acid metabolic process | IEP | HCCA |
| BP | GO:0009071 | serine family amino acid catabolic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| MF | GO:0010309 | acireductone dioxygenase [iron(II)-requiring] activity | IEP | HCCA |
| BP | GO:0016043 | cellular component organization | IEP | HCCA |
| BP | GO:0016054 | organic acid catabolic process | IEP | HCCA |
| MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
| MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | HCCA |
| MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | HCCA |
| MF | GO:0016634 | oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor | IEP | HCCA |
| MF | GO:0016638 | oxidoreductase activity, acting on the CH-NH2 group of donors | IEP | HCCA |
| MF | GO:0016642 | oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor | IEP | HCCA |
| MF | GO:0016701 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen | IEP | HCCA |
| MF | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | IEP | HCCA |
| MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | HCCA |
| MF | GO:0016829 | lyase activity | IEP | HCCA |
| MF | GO:0016835 | carbon-oxygen lyase activity | IEP | HCCA |
| MF | GO:0016836 | hydro-lyase activity | IEP | HCCA |
| MF | GO:0016853 | isomerase activity | IEP | HCCA |
| MF | GO:0016854 | racemase and epimerase activity | IEP | HCCA |
| MF | GO:0016857 | racemase and epimerase activity, acting on carbohydrates and derivatives | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | HCCA |
| MF | GO:0019842 | vitamin binding | IEP | HCCA |
| BP | GO:0022411 | cellular component disassembly | IEP | HCCA |
| MF | GO:0030170 | pyridoxal phosphate binding | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| BP | GO:0032984 | protein-containing complex disassembly | IEP | HCCA |
| BP | GO:0033013 | tetrapyrrole metabolic process | IEP | HCCA |
| BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0043436 | oxoacid metabolic process | IEP | HCCA |
| BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
| BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
| BP | GO:0044282 | small molecule catabolic process | IEP | HCCA |
| BP | GO:0046395 | carboxylic acid catabolic process | IEP | HCCA |
| MF | GO:0051213 | dioxygenase activity | IEP | HCCA |
| MF | GO:0051287 | NAD binding | IEP | HCCA |
| MF | GO:0070279 | vitamin B6 binding | IEP | HCCA |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
| BP | GO:0110102 | ribulose bisphosphate carboxylase complex assembly | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| BP | GO:1901565 | organonitrogen compound catabolic process | IEP | HCCA |
| BP | GO:1901605 | alpha-amino acid metabolic process | IEP | HCCA |
| BP | GO:1901606 | alpha-amino acid catabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR008030 | NmrA-like | 98 | 319 |
| No external refs found! |