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  5. Aob_g07915

Aob_g07915


Description : co-chaperone *(Jjj1) & original description: none


Gene families : OG0005255 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005255_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g07915
Cluster HCCA: Cluster_187

Target Alias Description ECC score Gene Family Method Actions
Aev_g06762 No alias co-chaperone *(Jjj1) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g01735 No alias co-chaperone *(Jjj1) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g04917 No alias co-chaperone *(Jjj1) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g15738 No alias co-chaperone *(Jjj1) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e039593_P002 Zm00001e039593 co-chaperone (Jjj1) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005685 U1 snRNP IEP HCCA
CC GO:0005694 chromosome IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006376 mRNA splice site selection IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 7 75
IPR022755 Znf_C2H2_jaz 315 339
No external refs found!