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  5. Lfl_g21791

Lfl_g21791


Description : not classified & original description: none


Gene families : OG0003115 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003115_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g21791
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
AT3G51730 No alias saposin B domain-containing protein 0.02 OrthoFinder output from all 47 species
Adi_g008974 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g056559 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g37069 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.28G021800.1 Ceric.28G021800 not classified & original description: pacid=50570326... 0.04 OrthoFinder output from all 47 species
Ceric.28G049500.1 Ceric.28G049500 not classified & original description: pacid=50570962... 0.03 OrthoFinder output from all 47 species
Gb_31133 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os12g02094.1 LOC_Os12g02094 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g00513 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp1g07360.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g34523 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0144.g022940 No alias not classified & original description: CDS=145-1230 0.03 OrthoFinder output from all 47 species
Sam_g50592 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc09g042700.4.1 Solyc09g042700 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0004455 ketol-acid reductoisomerase activity IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0007186 G protein-coupled receptor signaling pathway IEP HCCA
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP HCCA
BP GO:0009081 branched-chain amino acid metabolic process IEP HCCA
BP GO:0009082 branched-chain amino acid biosynthetic process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR008138 SapB_2 297 330
IPR008138 SapB_2 216 247
IPR007856 SapB_1 175 211
No external refs found!