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  5. Lfl_g21758

Lfl_g21758 (atnudt16, NUDT16)


Aliases : atnudt16, NUDT16

Description : not classified & original description: none


Gene families : OG0001213 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001213_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g21758

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene44605.t1 atnudt16,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01008469001 atnudt17, NUDT17 Nudix hydrolase 17, mitochondrial OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01011668001 NUDT18, atnudt18 Nudix hydrolase 18, mitochondrial OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os02g50130.1 atnudt21,... Nudix hydrolase 21, chloroplastic OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os04g32740.1 NUDT12,... Nudix hydrolase 12, mitochondrial OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os06g14420.1 atnudt21,... Nudix hydrolase 21, chloroplastic OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc01g005390.3.1 NUDT18,... Nudix hydrolase 18, mitochondrial OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc03g118470.4.1 atnudt17,... Nudix hydrolase 17, mitochondrial OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc06g068900.4.1 atnudt17,... Nudix hydrolase 17, mitochondrial OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e015741_P001 NUDT18,... Nudix hydrolase 18, mitochondrial OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e024214_P001 NUDT12,... Nudix hydrolase 13, mitochondrial OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e036756_P001 atnudt21,... Nudix hydrolase 21, chloroplastic OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e040796_P001 ATNUDX13,... Nudix hydrolase 13, mitochondrial OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR000086 NUDIX_hydrolase_dom 24 153
No external refs found!