1. Home
  2. Species
  3. Abrodictyum obscurum
  4. Sequence
  5. Aob_g01292

Aob_g01292 (YKT61, ATGP1, ATYKT61)


Aliases : YKT61, ATGP1, ATYKT61

Description : R-type YKT6-group component of SNARE longin membrane fusion complex & original description: none


Gene families : OG0002670 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002670_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g01292
Cluster HCCA: Cluster_156

Target Alias Description ECC score Gene Family Method Actions
Cre17.g728150 YKT61, ATGP1, ATYKT61 Vesicle trafficking.SNARE target membrane recognition... 0.01 OrthoFinder output from all 47 species
Ore_g29192 YKT61, ATGP1, ATYKT61 R-type YKT6-group component of SNARE longin membrane... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
InterPro domains Description Start Stop
IPR042855 V_SNARE_CC 139 196
IPR010908 Longin_dom 50 115
No external refs found!