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  5. Aob_g00497

Aob_g00497 (GDC1)


Aliases : GDC1

Description : SRP insertion system TIC-to-SRP handover factor *(LTD) & original description: none


Gene families : OG0006316 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006316_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g00497
Cluster HCCA: Cluster_173

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00062p00076280 GDC1,... Protein LHCP TRANSLOCATION DEFECT OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G50900 GDC1 Ankyrin repeat family protein 0.11 OrthoFinder output from all 47 species
Adi_g005475 GDC1 SRP insertion system TIC-to-SRP handover factor *(LTD) &... 0.02 OrthoFinder output from all 47 species
Aop_g15935 GDC1 SRP insertion system TIC-to-SRP handover factor *(LTD) &... 0.03 OrthoFinder output from all 47 species
Azfi_s0034.g025338 GDC1 SRP insertion system TIC-to-SRP handover factor *(LTD) &... 0.03 OrthoFinder output from all 47 species
Cba_g00456 GDC1 SRP insertion system TIC-to-SRP handover factor *(LTD) &... 0.02 OrthoFinder output from all 47 species
Cre12.g551950 GDC1 Protein LHCP TRANSLOCATION DEFECT OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Dac_g00424 GDC1 SRP insertion system TIC-to-SRP handover factor *(LTD) &... 0.04 OrthoFinder output from all 47 species
Dcu_g05121 GDC1 SRP insertion system TIC-to-SRP handover factor *(LTD) &... 0.07 OrthoFinder output from all 47 species
Dde_g00160 GDC1 SRP insertion system TIC-to-SRP handover factor *(LTD) &... 0.05 OrthoFinder output from all 47 species
Ehy_g00469 GDC1 SRP insertion system TIC-to-SRP handover factor *(LTD) &... 0.02 OrthoFinder output from all 47 species
GSVIVT01002001001 GDC1 Protein LHCP TRANSLOCATION DEFECT OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
Gb_05108 GDC1 SRP insertion system TIC-to-SRP handover factor (LTD) 0.02 OrthoFinder output from all 47 species
Gb_05109 GDC1 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os07g33660.1 GDC1, LOC_Os07g33660 SRP insertion system TIC-to-SRP handover factor (LTD) 0.06 OrthoFinder output from all 47 species
Len_g02031 GDC1 SRP insertion system TIC-to-SRP handover factor *(LTD) &... 0.04 OrthoFinder output from all 47 species
Lfl_g00282 GDC1 SRP insertion system TIC-to-SRP handover factor *(LTD) &... 0.04 OrthoFinder output from all 47 species
Mp3g06400.1 GDC1 SRP insertion system TIC-to-SRP handover factor (LTD) 0.08 OrthoFinder output from all 47 species
Nbi_g01699 GDC1 SRP insertion system TIC-to-SRP handover factor *(LTD) &... 0.02 OrthoFinder output from all 47 species
Pnu_g26583 GDC1 SRP insertion system TIC-to-SRP handover factor *(LTD) &... 0.06 OrthoFinder output from all 47 species
Pp3c5_16520V3.1 GDC1, Pp3c5_16520 Ankyrin repeat family protein 0.03 OrthoFinder output from all 47 species
Ppi_g04901 GDC1 SRP insertion system TIC-to-SRP handover factor *(LTD) &... 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g002932 GDC1 SRP insertion system TIC-to-SRP handover factor *(LTD) &... 0.04 OrthoFinder output from all 47 species
Sam_g23702 No alias SRP insertion system TIC-to-SRP handover factor *(LTD) &... 0.03 OrthoFinder output from all 47 species
Smo228083 GDC1 Protein LHCP TRANSLOCATION DEFECT OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Spa_g51015 GDC1 SRP insertion system TIC-to-SRP handover factor *(LTD) &... 0.03 OrthoFinder output from all 47 species
Zm00001e035117_P001 GDC1, Zm00001e035117 SRP insertion system TIC-to-SRP handover factor (LTD) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004089 carbonate dehydratase activity IEP HCCA
MF GO:0004332 fructose-bisphosphate aldolase activity IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:0017004 cytochrome complex assembly IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!