1. Home
  2. Species
  3. Davallia denticulata
  4. Sequence
  5. Dde_g47062

Dde_g47062


Description : EC_3.2 glycosylase & original description: none


Gene families : OG0000696 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000696_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g47062
Cluster HCCA: Cluster_168

Target Alias Description ECC score Gene Family Method Actions
AT4G19740 No alias Glycosyl hydrolase superfamily protein 0.04 OrthoFinder output from all 47 species
Aev_g11597 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g20488 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g17013 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0156.g053688 No alias EC_3.2 glycosylase & original description: CDS=140-1324 0.03 OrthoFinder output from all 47 species
Ceric.01G059200.1 Ceric.01G059200 EC_3.2 glycosylase & original description:... 0.03 OrthoFinder output from all 47 species
Dde_g17721 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01001059001 No alias Class V chitinase OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
MA_124661g0010 No alias no description available(sp|a0a072ur65|cht5b_medtr :... 0.02 OrthoFinder output from all 47 species
Mp8g05790.1 No alias no description available(sp|a0a1b1j8z2|chit5_lotja :... 0.02 OrthoFinder output from all 47 species
Nbi_g12849 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g65217 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g00782 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g11685 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g51876 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Smo410071 No alias Class V chitinase OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001223 Glyco_hydro18_cat 36 358
No external refs found!