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  5. Dde_g46540

Dde_g46540


Description : not classified & original description: none


Gene families : OG0016483 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0016483_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g46540

Target Alias Description ECC score Gene Family Method Actions
Adi_g003780 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05853 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g55554 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g13336 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004814 arginine-tRNA ligase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006420 arginyl-tRNA aminoacylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 233 260
IPR002885 Pentatricopeptide_repeat 127 156
IPR002885 Pentatricopeptide_repeat 99 121
IPR002885 Pentatricopeptide_repeat 158 205
IPR002885 Pentatricopeptide_repeat 21 68
No external refs found!