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  5. Dde_g41938

Dde_g41938 (HTA6)


Aliases : HTA6

Description : histone *(H2A) & original description: none


Gene families : OG0000117 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000117_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g41938

Target Alias Description ECC score Gene Family Method Actions
Adi_g003557 HTA6 histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g043980 RAT5, HTA1, ATHTA1 histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g02581 RAT5, HTA1, ATHTA1 histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene00233.t1 GAMMA-H2AX,... histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.12G035500.1 GAMMA-H2AX,... histone *(H2A) & original description: pacid=50600851... 0.05 OrthoFinder output from all 47 species
Ceric.32G068500.1 GAMMA-H2AX,... histone *(H2A) & original description: pacid=50597336... 0.03 OrthoFinder output from all 47 species
Cre06.g266700 HTA10 Chromatin organisation.histones.H2A-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g268050 HTA10 Chromatin organisation.histones.H2A-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g268300 HTA10 Chromatin organisation.histones.H2A-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g271350 HTA10 Chromatin organisation.histones.H2A-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g273900 HTA10 Chromatin organisation.histones.H2A-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g274200 HTA10 Chromatin organisation.histones.H2A-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g274800 HTA10 Chromatin organisation.histones.H2A-type histone 0.01 OrthoFinder output from all 47 species
Cre06.g275850 HTA10 Chromatin organisation.histones.H2A-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g276500 HTA10 Chromatin organisation.histones.H2A-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g276950 HTA10 Chromatin organisation.histones.H2A-type histone 0.02 OrthoFinder output from all 47 species
Cre12.g504750 HTA10 Chromatin organisation.histones.H2A-type histone 0.02 OrthoFinder output from all 47 species
Cre12.g505550 HTA10 Chromatin organisation.histones.H2A-type histone 0.02 OrthoFinder output from all 47 species
Cre12.g506250 HTA10 Chromatin organisation.histones.H2A-type histone 0.02 OrthoFinder output from all 47 species
Cre17.g708550 HTA10 Chromatin organisation.histones.H2A-type histone 0.02 OrthoFinder output from all 47 species
Cre17.g709200 HTA10 Chromatin organisation.histones.H2A-type histone 0.02 OrthoFinder output from all 47 species
Cre17.g711700 HTA10 Chromatin organisation.histones.H2A-type histone 0.02 OrthoFinder output from all 47 species
Cre17.g713400 HTA10 Chromatin organisation.histones.H2A-type histone 0.02 OrthoFinder output from all 47 species
MA_213048g0010 HTA7 histone (H2A) 0.04 OrthoFinder output from all 47 species
Solyc09g010400.3.1 HTA12, Solyc09g010400 histone (H2A) 0.02 OrthoFinder output from all 47 species
Solyc11g073250.2.1 HTA12, Solyc11g073250 histone (H2A) 0.04 OrthoFinder output from all 47 species
Spa_g03889 HTA7 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g32347 HTA6 histone *(H2A) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g32923 HTA6 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e011643_P001 HTA6, Zm00001e011643 histone (H2A) 0.02 OrthoFinder output from all 47 species
Zm00001e034815_P001 HTA12, Zm00001e034815 histone (H2A) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
CC GO:0000786 nucleosome IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0005375 copper ion transmembrane transporter activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006825 copper ion transport IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0035434 copper ion transmembrane transport IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 46 125
IPR032454 Histone_H2A_C 128 161
No external refs found!