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  5. Lfl_g18913

Lfl_g18913 (COI1)


Aliases : COI1

Description : component *(COI) of jasmonic acid receptor complex & original description: none


Gene families : OG0000211 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000211_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g18913

Target Alias Description ECC score Gene Family Method Actions
AT3G26810 AFB2 auxin signaling F-box 2 0.02 OrthoFinder output from all 47 species
AT5G49980 AFB5 auxin F-box protein 5 0.02 OrthoFinder output from all 47 species
Adi_g015381 COI1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05737 TIR1 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.02 OrthoFinder output from all 47 species
Aob_g02310 TIR1 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.04 OrthoFinder output from all 47 species
Aob_g11099 TIR1 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.02 OrthoFinder output from all 47 species
Aop_g02221 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.02 OrthoFinder output from all 47 species
Aspi01Gene05156.t1 COI1, Aspi01Gene05156 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene32882.t1 COI1, Aspi01Gene32882 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.11G069600.1 COI1, Ceric.11G069600 component *(COI) of jasmonic acid receptor complex &... 0.04 OrthoFinder output from all 47 species
Ceric.1Z143900.1 COI1, Ceric.1Z143900 not classified & original description: pacid=50567868... 0.03 OrthoFinder output from all 47 species
Ceric.1Z144000.1 COI1, Ceric.1Z144000 component *(COI) of jasmonic acid receptor complex &... 0.03 OrthoFinder output from all 47 species
Dcu_g13244 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Ehy_g03881 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.02 OrthoFinder output from all 47 species
Ehy_g06039 TIR1 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.02 OrthoFinder output from all 47 species
Ehy_g07920 TIR1 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
GSVIVT01003183001 TIR1 Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Gb_04106 COI1 component COI of jasmonic acid receptor complex 0.02 OrthoFinder output from all 47 species
Gb_41378 COI1 Coronatine-insensitive protein homolog 1a OS=Oryza... 0.03 OrthoFinder output from all 47 species
Len_g15985 COI1 component *(COI) of jasmonic acid receptor complex &... 0.04 OrthoFinder output from all 47 species
Lfl_g03214 COI1 component *(COI) of jasmonic acid receptor complex &... 0.03 OrthoFinder output from all 47 species
MA_108477g0010 COI1 component COI of jasmonic acid receptor complex 0.02 OrthoFinder output from all 47 species
Mp2g26590.1 COI1 component COI of jasmonic acid receptor complex 0.02 OrthoFinder output from all 47 species
Nbi_g01449 TIR1 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.02 OrthoFinder output from all 47 species
Pnu_g18805 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Ppi_g05252 COI1 component *(COI) of jasmonic acid receptor complex &... 0.03 OrthoFinder output from all 47 species
Smo168175 AFB2 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Spa_g07433 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Spa_g28126 COI1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e023831_P001 Zm00001e023831 component TIR1/AFB of auxin receptor complex. component... 0.02 OrthoFinder output from all 47 species
Zm00001e027505_P001 TIR1, Zm00001e027505 component TIR1/AFB of auxin receptor complex. component... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004813 alanine-tRNA ligase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006419 alanyl-tRNA aminoacylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR041567 COI1_F-box 27 65
IPR041101 Transp_inhibit 86 138
No external refs found!