Description : DNA exonuclease *(DPD1) & original description: none
Gene families : OG0005306 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005306_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Dde_g25825 | |
Cluster | HCCA: Cluster_6 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Spa_g52608 | No alias | DNA exonuclease *(DPD1) & original description: none | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005524 | ATP binding | IEA | Interproscan |
BP | GO:0006298 | mismatch repair | IEA | Interproscan |
MF | GO:0030983 | mismatched DNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000902 | cell morphogenesis | IEP | HCCA |
MF | GO:0004594 | pantothenate kinase activity | IEP | HCCA |
BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | HCCA |
MF | GO:0008270 | zinc ion binding | IEP | HCCA |
BP | GO:0009152 | purine ribonucleotide biosynthetic process | IEP | HCCA |
BP | GO:0009165 | nucleotide biosynthetic process | IEP | HCCA |
BP | GO:0009260 | ribonucleotide biosynthetic process | IEP | HCCA |
BP | GO:0009653 | anatomical structure morphogenesis | IEP | HCCA |
MF | GO:0010277 | chlorophyllide a oxygenase [overall] activity | IEP | HCCA |
BP | GO:0015936 | coenzyme A metabolic process | IEP | HCCA |
BP | GO:0015937 | coenzyme A biosynthetic process | IEP | HCCA |
MF | GO:0016701 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen | IEP | HCCA |
MF | GO:0016703 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) | IEP | HCCA |
CC | GO:0019867 | outer membrane | IEP | HCCA |
BP | GO:0032502 | developmental process | IEP | HCCA |
BP | GO:0033865 | nucleoside bisphosphate metabolic process | IEP | HCCA |
BP | GO:0033866 | nucleoside bisphosphate biosynthetic process | IEP | HCCA |
BP | GO:0033875 | ribonucleoside bisphosphate metabolic process | IEP | HCCA |
BP | GO:0034030 | ribonucleoside bisphosphate biosynthetic process | IEP | HCCA |
BP | GO:0034032 | purine nucleoside bisphosphate metabolic process | IEP | HCCA |
BP | GO:0034033 | purine nucleoside bisphosphate biosynthetic process | IEP | HCCA |
MF | GO:0043169 | cation binding | IEP | HCCA |
BP | GO:0046390 | ribose phosphate biosynthetic process | IEP | HCCA |
MF | GO:0046872 | metal ion binding | IEP | HCCA |
MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | HCCA |
BP | GO:0090407 | organophosphate biosynthetic process | IEP | HCCA |
BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | HCCA |
BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR007860 | DNA_mmatch_repair_MutS_con_dom | 660 | 784 |
IPR007696 | DNA_mismatch_repair_MutS_core | 811 | 1104 |
IPR000432 | DNA_mismatch_repair_MutS_C | 1189 | 1368 |
IPR007695 | DNA_mismatch_repair_MutS-lik_N | 542 | 650 |
IPR013520 | Exonuclease_RNaseT/DNA_pol3 | 226 | 394 |
IPR007861 | DNA_mismatch_repair_MutS_clamp | 969 | 1060 |
No external refs found! |