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  5. Dde_g19092

Dde_g19092 (HTB4)


Aliases : HTB4

Description : histone *(H2B) & original description: none


Gene families : OG0000176 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000176_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g19092

Target Alias Description ECC score Gene Family Method Actions
Adi_g032961 HTB4 histone *(H2B) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g04372 No alias histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g28637 HTB4 histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05479 No alias histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene58540.t1 HTB1, Aspi01Gene58540 histone *(H2B) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.03G007900.1 HTB4, Ceric.03G007900 histone *(H2B) & original description: pacid=50571513... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000944.18 No alias Chromatin organisation.histones.H2B-type histone 0.01 OrthoFinder output from all 47 species
Dac_g01811 HTB4 histone *(H2B) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01025023001 No alias Chromatin organisation.histones.H2B-type histone 0.02 OrthoFinder output from all 47 species
MA_111473g0010 HTB11 histone (H2B) 0.02 OrthoFinder output from all 47 species
MA_9293473g0010 HTB11 histone (H2B) 0.02 OrthoFinder output from all 47 species
Msp_g42770 No alias histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c13_23540V3.1 HTB1, Pp3c13_23540 Histone superfamily protein 0.02 OrthoFinder output from all 47 species
Ppi_g60088 HTB4 histone *(H2B) & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g60089 HTB4 histone *(H2B) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g075800.1.1 HTB11, Solyc06g075800 histone (H2B) 0.02 OrthoFinder output from all 47 species
Solyc11g007920.1.1 HTB11, Solyc11g007920 histone (H2B) 0.02 OrthoFinder output from all 47 species
Tin_g13958 No alias histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e038466_P001 HTB1, Zm00001e038466 histone (H2B) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 5 124
No external refs found!