Aliases : LSH6
Description : plant-specific ALOG-type transcription factor & original description: none
Gene families : OG0001118 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001118_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT2G31160 | LSH3 | Protein of unknown function (DUF640) | 0.03 | OrthoFinder output from all 47 species | |
AT5G58500 | LSH5 | Protein of unknown function (DUF640) | 0.03 | OrthoFinder output from all 47 species | |
Ala_g06922 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Als_g04816 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Als_g17249 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.14G090800.1 | LSH6, Ceric.14G090800 | plant-specific ALOG-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01021215001 | LSH10 | Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01024677001 | LSH6 | Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os04g43580.2 | LSH4, LOC_Os04g43580 | Protein G1-like3 OS=Oryza sativa subsp. indica... | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g02008 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Pir_g20213 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g32132 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.06 | OrthoFinder output from all 47 species | |
Spa_g04648 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e013711_P001 | LSH4, Zm00001e013711 | Protein G1-like2 OS=Oryza sativa subsp. indica... | 0.01 | OrthoFinder output from all 47 species | |
Zm00001e027222_P001 | LSH6, Zm00001e027222 | Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e028824_P001 | LSH6, Zm00001e028824 | Protein G1-like8 OS=Oryza sativa subsp. indica... | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000096 | sulfur amino acid metabolic process | IEP | HCCA |
BP | GO:0000097 | sulfur amino acid biosynthetic process | IEP | HCCA |
MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
MF | GO:0004252 | serine-type endopeptidase activity | IEP | HCCA |
MF | GO:0005216 | monoatomic ion channel activity | IEP | HCCA |
CC | GO:0005575 | cellular_component | IEP | HCCA |
CC | GO:0005737 | cytoplasm | IEP | HCCA |
BP | GO:0006534 | cysteine metabolic process | IEP | HCCA |
BP | GO:0006535 | cysteine biosynthetic process from serine | IEP | HCCA |
BP | GO:0006563 | L-serine metabolic process | IEP | HCCA |
BP | GO:0006790 | sulfur compound metabolic process | IEP | HCCA |
MF | GO:0008236 | serine-type peptidase activity | IEP | HCCA |
MF | GO:0008374 | O-acyltransferase activity | IEP | HCCA |
BP | GO:0008652 | amino acid biosynthetic process | IEP | HCCA |
MF | GO:0009001 | serine O-acetyltransferase activity | IEP | HCCA |
BP | GO:0009069 | serine family amino acid metabolic process | IEP | HCCA |
BP | GO:0009070 | serine family amino acid biosynthetic process | IEP | HCCA |
MF | GO:0015267 | channel activity | IEP | HCCA |
MF | GO:0015276 | ligand-gated monoatomic ion channel activity | IEP | HCCA |
CC | GO:0016020 | membrane | IEP | HCCA |
BP | GO:0016053 | organic acid biosynthetic process | IEP | HCCA |
MF | GO:0016407 | acetyltransferase activity | IEP | HCCA |
MF | GO:0016412 | serine O-acyltransferase activity | IEP | HCCA |
MF | GO:0016413 | O-acetyltransferase activity | IEP | HCCA |
MF | GO:0017171 | serine hydrolase activity | IEP | HCCA |
BP | GO:0019344 | cysteine biosynthetic process | IEP | HCCA |
MF | GO:0022803 | passive transmembrane transporter activity | IEP | HCCA |
MF | GO:0022834 | ligand-gated channel activity | IEP | HCCA |
MF | GO:0022836 | gated channel activity | IEP | HCCA |
MF | GO:0022839 | monoatomic ion gated channel activity | IEP | HCCA |
BP | GO:0044272 | sulfur compound biosynthetic process | IEP | HCCA |
BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | HCCA |
CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
BP | GO:1901605 | alpha-amino acid metabolic process | IEP | HCCA |
BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR006936 | ALOG_dom | 73 | 191 |
No external refs found! |