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  5. Dde_g12612

Dde_g12612 (TWN3, RPS9)


Aliases : TWN3, RPS9

Description : component *(uS9c) of small plastid ribosomal-subunit proteome & original description: none


Gene families : OG0002624 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002624_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g12612
Cluster HCCA: Cluster_119

Target Alias Description ECC score Gene Family Method Actions
Ala_g09988 TWN3, RPS9 component *(uS9c) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Aop_g12650 TWN3, RPS9 component *(uS9c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Dac_g14878 TWN3, RPS9 component *(uS9c) of small plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Dcu_g06113 TWN3, RPS9 component *(uS9c) of small plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Ehy_g04376 TWN3, RPS9 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Gb_29571 TWN3, RPS9 30S ribosomal protein S9, chloroplastic OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_39922 TWN3, RPS9 30S ribosomal protein S9, chloroplastic OS=Spinacia... 0.03 OrthoFinder output from all 47 species
LOC_Os03g55930.1 TWN3, RPS9,... component psRPS9 of small ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
Len_g10588 TWN3, RPS9 component *(uS9c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Lfl_g01771 No alias component *(uS9m) of small mitoribosomal-subunit... 0.03 OrthoFinder output from all 47 species
MA_18349g0020 TWN3, RPS9 30S ribosomal protein S9, chloroplastic OS=Spinacia... 0.04 OrthoFinder output from all 47 species
Mp3g01740.1 TWN3, RPS9 component psRPS9 of small ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
Nbi_g00484 TWN3, RPS9 component *(uS9c) of small plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Pnu_g19238 TWN3, RPS9 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0109.g020559 TWN3, RPS9 component *(uS9c) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Smo17067 TWN3, RPS9 30S ribosomal protein S9, chloroplastic OS=Spinacia oleracea 0.03 OrthoFinder output from all 47 species
Spa_g04655 TWN3, RPS9 component *(uS9c) of small plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Spa_g04656 TWN3, RPS9 component *(uS9c) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Spa_g13826 TWN3, RPS9 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g00437 TWN3, RPS9 component *(uS9c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Zm00001e005809_P002 TWN3, RPS9,... component psRPS9 of small ribosomal subunit proteome 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000754 Ribosomal_S9 100 221
No external refs found!