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Description : cohesin cofactor *(PDS5) & original description: none
Gene families : OG0000616 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000616_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00061p00213120 | evm_27.TU.AmTr_v1... | Cell cycle.mitosis and meiosis.sister chromatid... | 0.02 | OrthoFinder output from all 47 species | |
| AT1G15940 | No alias | Tudor/PWWP/MBT superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g022401 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g117140 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g06182 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g32765 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g20243 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g08128 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0013.g013139 | No alias | cohesin cofactor *(PDS5) & original description: CDS=60-4409 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g04527 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Cba_g18100 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.11G037000.1 | Ceric.11G037000 | cohesin cofactor *(PDS5) & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.34G009800.1 | Ceric.34G009800 | cohesin cofactor *(PDS5) & original description:... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.37G021700.1 | Ceric.37G021700 | cohesin cofactor *(PDS5) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000076.96 | No alias | No description available | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g22018 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g14818 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g36421 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g02974 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01002731001 | No alias | Cell cycle.mitosis and meiosis.sister chromatid... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01002824001 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01008876001 | No alias | Cell cycle.mitosis and meiosis.sister chromatid... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_23673 | No alias | cohesin cofactor (PDS5) | 0.02 | OrthoFinder output from all 47 species | |
| Len_g21968 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g46602 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g09667 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Pir_g14289 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g16328 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g36032 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0007.g003457 | No alias | cohesin cofactor *(PDS5) & original description: CDS=365-5053 | 0.06 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0038.g011973 | No alias | cohesin cofactor *(PDS5) & original description: CDS=154-4911 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g14013 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g18018 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g35729 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc06g065710.3.1 | Solyc06g065710 | cohesin cofactor (PDS5) | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g09451 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Spa_g18111 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g45754 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e007658_P001 | Zm00001e007658 | cohesin cofactor (PDS5) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e015094_P002 | Zm00001e015094 | cohesin cofactor (PDS5) | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e030989_P001 | Zm00001e030989 | cohesin cofactor (PDS5) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e036853_P003 | Zm00001e036853 | cohesin cofactor (PDS5) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | IEP | HCCA |
| CC | GO:0000439 | transcription factor TFIIH core complex | IEP | HCCA |
| BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | HCCA |
| MF | GO:0001671 | ATPase activator activity | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0004674 | protein serine/threonine kinase activity | IEP | HCCA |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| CC | GO:0005667 | transcription regulator complex | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0006281 | DNA repair | IEP | HCCA |
| BP | GO:0006289 | nucleotide-excision repair | IEP | HCCA |
| BP | GO:0006401 | RNA catabolic process | IEP | HCCA |
| BP | GO:0006402 | mRNA catabolic process | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
| MF | GO:0008236 | serine-type peptidase activity | IEP | HCCA |
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0010629 | negative regulation of gene expression | IEP | HCCA |
| MF | GO:0015291 | secondary active transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015293 | symporter activity | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| MF | GO:0017171 | serine hydrolase activity | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0019439 | aromatic compound catabolic process | IEP | HCCA |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
| MF | GO:0022804 | active transmembrane transporter activity | IEP | HCCA |
| MF | GO:0031072 | heat shock protein binding | IEP | HCCA |
| BP | GO:0033554 | cellular response to stress | IEP | HCCA |
| BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | HCCA |
| BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
| BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0046700 | heterocycle catabolic process | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
| BP | GO:0048519 | negative regulation of biological process | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| MF | GO:0051082 | unfolded protein binding | IEP | HCCA |
| BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| CC | GO:0090575 | RNA polymerase II transcription regulator complex | IEP | HCCA |
| MF | GO:0098772 | molecular function regulator activity | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| MF | GO:0140677 | molecular function activator activity | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| BP | GO:1901361 | organic cyclic compound catabolic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |