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  5. Dde_g07957

Dde_g07957


Description : not classified & original description: none


Gene families : OG0006499 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006499_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g07957
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00020p00012640 evm_27.TU.AmTr_v1... 30S ribosomal protein S1, chloroplastic OS=Spinacia oleracea 0.07 OrthoFinder output from all 47 species
AT3G23700 No alias Nucleic acid-binding proteins superfamily 0.06 OrthoFinder output from all 47 species
Aev_g03265 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g04569 No alias not classified & original description: none 0.13 OrthoFinder output from all 47 species
Als_g08286 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g01702 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g27368 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aspi01Gene14361.t1 Aspi01Gene14361 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0534.g076070 No alias not classified & original description: CDS=250-1461 0.08 OrthoFinder output from all 47 species
Cba_g16549 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ceric.11G080900.1 Ceric.11G080900 not classified & original description: pacid=50596374... 0.07 OrthoFinder output from all 47 species
Cre03.g148950 No alias 30S ribosomal protein S1, chloroplastic OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Dac_g02753 No alias not classified & original description: none 0.13 OrthoFinder output from all 47 species
Dcu_g03799 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g01039 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
GSVIVT01031632001 No alias 30S ribosomal protein S1, chloroplastic OS=Spinacia oleracea 0.05 OrthoFinder output from all 47 species
Gb_13624 No alias 30S ribosomal protein S1, chloroplastic OS=Spinacia... 0.08 OrthoFinder output from all 47 species
LOC_Os03g62780.1 LOC_Os03g62780 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Len_g12635 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Lfl_g01511 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
MA_37826g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp6g19820.1 No alias 30S ribosomal protein S1, chloroplastic OS=Spinacia... 0.04 OrthoFinder output from all 47 species
Msp_g04843 No alias not classified & original description: none 0.13 OrthoFinder output from all 47 species
Nbi_g02820 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g26841 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g40824 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Pir_g12492 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Pnu_g01274 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ppi_g05108 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Sacu_v1.1_s0160.g023855 No alias not classified & original description: CDS=194-1321 0.04 OrthoFinder output from all 47 species
Sam_g30081 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Smo96268 No alias 30S ribosomal protein S1, chloroplastic OS=Spinacia oleracea 0.07 OrthoFinder output from all 47 species
Spa_g11144 No alias not classified & original description: none 0.13 OrthoFinder output from all 47 species
Tin_g18988 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Tin_g23785 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Zm00001e006347_P003 Zm00001e006347 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004332 fructose-bisphosphate aldolase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003029 S1_domain 189 265
IPR003029 S1_domain 100 175
No external refs found!