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  5. Dde_g07919

Dde_g07919 (LHCA1)


Aliases : LHCA1

Description : component *(LHCa1) of LHC-I complex & original description: none


Gene families : OG0002748 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002748_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g07919
Cluster HCCA: Cluster_119

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00175p00040360 LHCA1,... Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.03 OrthoFinder output from all 47 species
AT3G54890 LHCA1 photosystem I light harvesting complex gene 1 0.06 OrthoFinder output from all 47 species
Adi_g076858 LHCA1 component *(LHCa1) of LHC-I complex & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g43112 LHCA1 component *(LHCa1) of LHC-I complex & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16965 LHCA1 component *(LHCa1) of LHC-I complex & original description: none 0.08 OrthoFinder output from all 47 species
Als_g25107 LHCA1 component *(LHCa1) of LHC-I complex & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g03905 LHCA1 component *(LHCa1) of LHC-I complex & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g16356 LHCA1 component *(LHCa1) of LHC-I complex & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g39130 LHCA1 component *(LHCa1) of LHC-I complex & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g53140 LHCA1 component *(LHCa1) of LHC-I complex & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0549.g076444 LHCA1 component *(LHCa1) of LHC-I complex & original... 0.04 OrthoFinder output from all 47 species
Cba_g26607 LHCA1 component *(LHCa1) of LHC-I complex & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.07G087800.1 LHCA1, Ceric.07G087800 component *(LHCa1) of LHC-I complex & original... 0.06 OrthoFinder output from all 47 species
Ceric.12G030000.1 LHCA1, Ceric.12G030000 component *(LHCa1) of LHC-I complex & original... 0.05 OrthoFinder output from all 47 species
Cre06.g283050 LHCA1 Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.06 OrthoFinder output from all 47 species
Dac_g06854 LHCA1 component *(LHCa1) of LHC-I complex & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g00729 LHCA1 component *(LHCa1) of LHC-I complex & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g34042 LHCA1 component *(LHCa1) of LHC-I complex & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g21883 LHCA1 component *(LHCa1) of LHC-I complex & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01016295001 LHCA1 Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.04 OrthoFinder output from all 47 species
Gb_18375 LHCA1 component LHCa1 of LHC-I complex 0.05 OrthoFinder output from all 47 species
LOC_Os06g21590.1 LHCA1, LOC_Os06g21590 component LHCa1 of LHC-I complex 0.04 OrthoFinder output from all 47 species
Len_g24144 LHCA1 component *(LHCa1) of LHC-I complex & original description: none 0.04 OrthoFinder output from all 47 species
Len_g30462 LHCA1 component *(LHCa1) of LHC-I complex & original description: none 0.03 OrthoFinder output from all 47 species
MA_10431493g0010 LHCA1 component LHCa1 of LHC-I complex 0.06 OrthoFinder output from all 47 species
Mp2g15420.1 LHCA1 component LHCa1 of LHC-I complex 0.03 OrthoFinder output from all 47 species
Msp_g05868 LHCA1 component *(LHCa1) of LHC-I complex & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g30412 LHCA1 component *(LHCa1) of LHC-I complex & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g36756 LHCA1 component *(LHCa1) of LHC-I complex & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g45079 LHCA1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g01863 LHCA1 component *(LHCa1) of LHC-I complex & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g06292 LHCA1 component *(LHCa1) of LHC-I complex & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c3_12510V3.1 LHCA1, Pp3c3_12510 photosystem I light harvesting complex gene 1 0.02 OrthoFinder output from all 47 species
Ppi_g49118 LHCA1 component *(LHCa1) of LHC-I complex & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002720 LHCA1 component *(LHCa1) of LHC-I complex & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0079.g017788 LHCA1 component *(LHCa1) of LHC-I complex & original... 0.03 OrthoFinder output from all 47 species
Sam_g14315 No alias component *(LHCa1) of LHC-I complex & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g14326 No alias component *(LHCa1) of LHC-I complex & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g19176 No alias component *(LHCa1) of LHC-I complex & original description: none 0.04 OrthoFinder output from all 47 species
Smo423144 LHCA1 Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.04 OrthoFinder output from all 47 species
Solyc05g056050.3.1 LHCA1, Solyc05g056050 component LHCa1 of LHC-I complex 0.06 OrthoFinder output from all 47 species
Solyc05g056060.4.1 LHCA1, Solyc05g056060 Chlorophyll a-b binding protein 6A, chloroplastic... 0.03 OrthoFinder output from all 47 species
Spa_g13153 LHCA1 component *(LHCa1) of LHC-I complex & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g13154 LHCA1 component *(LHCa1) of LHC-I complex & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g09881 LHCA1 component *(LHCa1) of LHC-I complex & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g19220 LHCA1 component *(LHCa1) of LHC-I complex & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e013742_P001 LHCA1, Zm00001e013742 component LHCa1 of LHC-I complex 0.03 OrthoFinder output from all 47 species
Zm00001e025141_P001 LHCA1, Zm00001e025141 component LHCa1 of LHC-I complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009536 plastid IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 58 212
No external refs found!