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  5. Dde_g06816

Dde_g06816


Description : not classified & original description: none


Gene families : OG0002372 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002372_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g06816
Cluster HCCA: Cluster_169

Target Alias Description ECC score Gene Family Method Actions
Adi_g004326 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005239 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g051123 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g069063 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g080317 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g097962 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g110160 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23941 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28682 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g33549 MEF19 ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g68075 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68548 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g43228 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g50233 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g17904 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g07244 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g08656 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12814 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g18121 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g23558 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g26562 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g32772 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g32864 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g33011 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g33040 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g35754 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g37491 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g40075 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g07491 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g10606 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g24583 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g29894 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Msp_g33944 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g32623 OTP82 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g02401 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57928 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g58531 CRR21 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05532 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g25185 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g20435 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g25557 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g48804 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g53360 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g55945 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g19797 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g27510 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g28102 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 158 204
IPR002885 Pentatricopeptide_repeat 132 155
IPR002885 Pentatricopeptide_repeat 234 259
No external refs found!