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  5. Lfl_g16381

Lfl_g16381


Description : EC_3.2 glycosylase & original description: none


Gene families : OG0002535 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002535_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g16381
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00158530 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.04 OrthoFinder output from all 47 species
AT4G29360 No alias O-Glycosyl hydrolases family 17 protein 0.05 OrthoFinder output from all 47 species
Ala_g27614 No alias EC_3.2 glycosylase & original description: none 0.06 OrthoFinder output from all 47 species
Als_g11891 No alias EC_3.2 glycosylase & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g04338 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene38106.t1 Aspi01Gene38106 EC_3.2 glycosylase & original description: none 0.1 OrthoFinder output from all 47 species
Azfi_s0136.g050962 No alias EC_3.2 glycosylase & original description: CDS=69-1574 0.04 OrthoFinder output from all 47 species
Ceric.29G070700.1 Ceric.29G070700 EC_3.2 glycosylase & original description:... 0.05 OrthoFinder output from all 47 species
Dac_g15313 No alias EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g16552 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g40044 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01015282001 No alias Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Len_g01266 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14869 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0053.g014084 No alias EC_3.2 glycosylase & original description: CDS=1-1821 0.02 OrthoFinder output from all 47 species
Sam_g29581 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g49364 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g51982 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g12160 No alias EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004797 thymidine kinase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009262 deoxyribonucleotide metabolic process IEP HCCA
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0019136 deoxynucleoside kinase activity IEP HCCA
MF GO:0019205 nucleobase-containing compound kinase activity IEP HCCA
MF GO:0019206 nucleoside kinase activity IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000490 Glyco_hydro_17 29 345
IPR012946 X8 367 439
No external refs found!