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  5. Dde_g02895

Dde_g02895 (YSL6)


Aliases : YSL6

Description : ferric cation-chelator transporter *(YSL) & original description: none


Gene families : OG0000334 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000334_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g02895
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
LOC_Os04g44300.1 YSL7, LOC_Os04g44300 iron chelator transporter (YSL). ferric cation-chelator... 0.02 OrthoFinder output from all 47 species
Mp4g10660.1 YSL6 iron chelator transporter (YSL). ferric cation-chelator... 0.03 OrthoFinder output from all 47 species
Pnu_g11994 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g55416 YSL7 ferric cation-chelator transporter *(YSL) & original... 0.02 OrthoFinder output from all 47 species
Sam_g16876 No alias iron chelator transporter *(YSL) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g19703 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g44565 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g16526 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0035673 oligopeptide transmembrane transporter activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000381 regulation of alternative mRNA splicing, via spliceosome IEP HCCA
MF GO:0004486 methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity IEP HCCA
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP HCCA
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043484 regulation of RNA splicing IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0048024 regulation of mRNA splicing, via spliceosome IEP HCCA
BP GO:0050684 regulation of mRNA processing IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1903311 regulation of mRNA metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR004813 OPT 49 664
No external refs found!