Aop_g31865 (AtWRKY20, WRKY20)


Aliases : AtWRKY20, WRKY20

Description : WRKY-type transcription factor & original description: none


Gene families : OG0000020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g31865

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00090300 WRKY4,... RNA biosynthesis.transcriptional activation.WRKY... 0.02 OrthoFinder output from all 47 species
Adi_g012796 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g021106 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g041348 ATWRKY50, WRKY50 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g060250 WRKY55, ATWRKY55 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene11216.t1 WRKY9, ATWRKY9,... WRKY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene17672.t1 WRKY28,... WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene47044.t1 WRKY26, Aspi01Gene47044 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene52797.t3 Aspi01Gene52797 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene57082.t1 WRKY43,... WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene60875.t1 WRKY3, Aspi01Gene60875 WRKY-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene64697.t1 WRKY6, ATWRKY6,... WRKY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene66845.t1 WRKY42,... WRKY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g06101 WRKY53, ATWRKY53 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g30936 WRKY4 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os05g46020.1 ATWRKY50,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Len_g28971 ATWRKY24, WRKY24 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g08941 AtWRKY20, WRKY20 WRKY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g18284 AtWRKY20, WRKY20 WRKY-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g26717 No alias WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g068460.3.1 ATWRKY40,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Solyc12g056745.1.1 ATWRKY51,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Spa_g00878 WRKY56, ATWRKY56 WRKY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR003657 WRKY_dom 524 580
IPR003657 WRKY_dom 357 413
No external refs found!