Aop_g25912 (WRKY28, ATWRKY28)

Aliases : WRKY28, ATWRKY28

Description : WRKY-type transcription factor & original description: none

Gene families : OG0000020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aop_g25912

Target	Alias	Description	ECC score	Gene Family Method
AT5G15130	WRKY72, ATWRKY72	WRKY DNA-binding protein 72	0.02	OrthoFinder output from all 47 species
AT5G41570	ATWRKY24, WRKY24	WRKY DNA-binding protein 24	0.01	OrthoFinder output from all 47 species
Adi_g021148	WRKY42, AtWRKY42	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g031754	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g058461	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g075760	WRKY42, AtWRKY42	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g109927	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Adi_g112197	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g114020	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g09415	WRKY28, ATWRKY28	WRKY-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Ala_g10395	WRKY55, ATWRKY55	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g32923	WRKY3	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g33360	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Als_g04382	WRKY4	WRKY-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Als_g20332	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Als_g23905	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Als_g24152	WRKY42, AtWRKY42	WRKY-type transcription factor & original description: none	0.06	OrthoFinder output from all 47 species
Als_g39118	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.06	OrthoFinder output from all 47 species
Als_g49189	WRKY42, AtWRKY42	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Als_g50608	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene00114.t1	WRKY53,...	WRKY-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene06722.t1	ATWRKY58,...	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene06724.t1	ATWRKY58,...	WRKY-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene17672.t1	WRKY28,...	WRKY-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene29744.t1	WRKY6, ATWRKY6,...	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene52709.t1	Aspi01Gene52709	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene54083.t1	WRKY6, ATWRKY6,...	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene57082.t1	WRKY43,...	WRKY-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene60875.t1	WRKY3, Aspi01Gene60875	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene66845.t1	WRKY42,...	WRKY-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Azfi_s0245.g059987	AtWRKY20, WRKY20	WRKY-type transcription factor & original description: CDS=1-2319	0.01	OrthoFinder output from all 47 species
Cba_g19033	WRKY53, ATWRKY53	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.04G004800.1	ATWRKY71,...	WRKY-type transcription factor & original description:...	0.02	OrthoFinder output from all 47 species
Ceric.08G068500.1	ATWRKY71,...	WRKY-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.1Z119500.1	WRKY28,...	WRKY-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Dac_g08845	WRKY56, ATWRKY56	WRKY-type transcription factor & original description: none	0.08	OrthoFinder output from all 47 species
Dac_g13375	WRKY4	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Dac_g28011	ATWRKY30, WRKY30	WRKY-type transcription factor & original description: none	0.06	OrthoFinder output from all 47 species
Dac_g34916	No alias	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g42615	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Dde_g27360	No alias	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g15580	WRKY75, ATWRKY75	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g19327	ATWRKY57, WRKY57	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g26863	WRKY49, ATWRKY49	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g27429	WRKY72, ATWRKY72	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01008046001	WRKY72, ATWRKY72	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
MA_103616g0010	WRKY6, ATWRKY6	transcription factor (WRKY)	0.01	OrthoFinder output from all 47 species
MA_10425932g0020	WRKY75, ATWRKY75	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Msp_g11048	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Msp_g19708	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Msp_g26422	WRKY4	WRKY-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Msp_g29117	WRKY55, ATWRKY55	WRKY-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Nbi_g01131	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Nbi_g11236	ATWRKY40, WRKY40	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g36467	WRKY55, ATWRKY55	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g05849	WRKY43, ATWRKY43	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g16650	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g22236	WRKY42, AtWRKY42	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g42318	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0016.g006969	WRKY6, ATWRKY6	WRKY-type transcription factor & original description:...	0.02	OrthoFinder output from all 47 species
Solyc05g007110.2.1	WRKY61,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Spa_g15879	ATWRKY24, WRKY24	WRKY-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Spa_g22896	ABO3, WRKY63, ATWRKY63	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g37539	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g38166	WRKY43, ATWRKY43	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g32456	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g39195	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	HCCA
MF	GO:0004649	poly(ADP-ribose) glycohydrolase activity	IEP	HCCA
BP	GO:0006282	regulation of DNA repair	IEP	HCCA
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	HCCA
BP	GO:0048583	regulation of response to stimulus	IEP	HCCA
BP	GO:0051052	regulation of DNA metabolic process	IEP	HCCA
BP	GO:0080134	regulation of response to stress	IEP	HCCA
BP	GO:0080135	regulation of cellular response to stress	IEP	HCCA
BP	GO:2001020	regulation of response to DNA damage stimulus	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	105	160

External Links

No external refs found!

Aop_g25912 (WRKY28, ATWRKY28)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation