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  5. Aop_g19947

Aop_g19947


Description : subunit epsilon of coat protein complex & original description: none


Gene families : OG0004408 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004408_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g19947
Cluster HCCA: Cluster_300

Target Alias Description ECC score Gene Family Method Actions
AT1G30630 No alias Coatomer epsilon subunit 0.06 OrthoFinder output from all 47 species
Adi_g014852 No alias subunit epsilon of coat protein complex & original... 0.03 OrthoFinder output from all 47 species
Als_g22069 No alias subunit epsilon of coat protein complex & original... 0.05 OrthoFinder output from all 47 species
Azfi_s0003.g007572 No alias subunit epsilon of coat protein complex & original... 0.03 OrthoFinder output from all 47 species
Dcu_g00711 No alias subunit epsilon of coat protein complex & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01021747001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.04 OrthoFinder output from all 47 species
Len_g08238 No alias subunit epsilon of coat protein complex & original... 0.03 OrthoFinder output from all 47 species
Mp1g28220.1 No alias subunit epsilon of coat protein complex 0.05 OrthoFinder output from all 47 species
Nbi_g02805 No alias subunit epsilon of coat protein complex & original... 0.02 OrthoFinder output from all 47 species
Pir_g01239 No alias subunit epsilon of coat protein complex & original... 0.05 OrthoFinder output from all 47 species
Ppi_g00633 No alias subunit epsilon of coat protein complex & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004429 No alias subunit epsilon of coat protein complex & original... 0.03 OrthoFinder output from all 47 species
Smo166040 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 OrthoFinder output from all 47 species
Solyc02g030243.1.1 Solyc02g030243 subunit epsilon of coat protein complex 0.03 OrthoFinder output from all 47 species
Solyc02g069585.1.1 Solyc02g069585 subunit epsilon of coat protein complex 0.04 OrthoFinder output from all 47 species
Tin_g00461 No alias subunit epsilon of coat protein complex & original... 0.06 OrthoFinder output from all 47 species
Zm00001e041631_P001 Zm00001e041631 subunit epsilon of coat protein complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
BP GO:0018279 protein N-linked glycosylation via asparagine IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!