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  5. Aop_g13038

Aop_g13038 (ELC, ATELC)


Aliases : ELC, ATELC

Description : not classified & original description: none


Gene families : OG0001430 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001430_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g13038

Target Alias Description ECC score Gene Family Method Actions
AT3G12400 ELC, ATELC Ubiquitin-conjugating enzyme/RWD-like protein 0.03 OrthoFinder output from all 47 species
AT5G13860 ELC-Like ELCH-like 0.03 OrthoFinder output from all 47 species
Aev_g37448 ELC, ATELC component *(VPS23) of ESCRT-I complex & original... 0.03 OrthoFinder output from all 47 species
Ala_g06399 ELC, ATELC not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g06410 ELC, ATELC component *(VPS23) of ESCRT-I complex & original... 0.03 OrthoFinder output from all 47 species
Ala_g22662 ELC, ATELC not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g03643 ELC, ATELC component *(VPS23) of ESCRT-I complex & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0022.g015948 ELC, ATELC not classified & original description: CDS=1-867 0.03 OrthoFinder output from all 47 species
Ceric.05G091900.1 ELC, ATELC,... not classified & original description: pacid=50578251... 0.03 OrthoFinder output from all 47 species
Ceric.13G070700.1 ELC, ATELC,... component *(VPS23) of ESCRT-I complex & original... 0.03 OrthoFinder output from all 47 species
Ceric.19G024800.1 ELC, ATELC,... not classified & original description: pacid=50575588... 0.03 OrthoFinder output from all 47 species
Ceric.38G038600.1 ELC, ATELC,... not classified & original description: pacid=50579331... 0.07 OrthoFinder output from all 47 species
Dac_g15170 ELC, ATELC not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g19079 ELC, ATELC not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g18027 ELC, ATELC component *(VPS23) of ESCRT-I complex & original... 0.03 OrthoFinder output from all 47 species
Dde_g08245 ELC-Like not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g03610 ELC, ATELC component *(VPS23) of ESCRT-I complex & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01018153001 ELC, ATELC Protein ELC OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Lfl_g01028 ELC, ATELC component *(VPS23) of ESCRT-I complex & original... 0.03 OrthoFinder output from all 47 species
Msp_g11096 ELC, ATELC component *(VPS23) of ESCRT-I complex & original... 0.05 OrthoFinder output from all 47 species
Nbi_g30867 ELC, ATELC not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g49059 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g01068 ELC, ATELC component *(VPS23) of ESCRT-I complex & original... 0.03 OrthoFinder output from all 47 species
Ppi_g10745 ELC, ATELC not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0119.g021324 ELC, ATELC not classified & original description: CDS=242-1315 0.04 OrthoFinder output from all 47 species
Solyc09g065770.1.1 Solyc09g065770 Protein ELC-like OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Solyc10g085590.1.1 ELC, ATELC,... component VPS23 of ESCRT-I complex 0.05 OrthoFinder output from all 47 species
Spa_g25951 ELC, ATELC not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14932 ELC, ATELC not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0015031 protein transport IEA Interproscan
BP GO:0036211 protein modification process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR017916 SB_dom 382 445
IPR008883 UEV_N 48 166
No external refs found!