1. Home
  2. Species
  3. Amblovenatum opulentum
  4. Sequence
  5. Aop_g12926

Aop_g12926


Description : Trihelix-type transcription factor & original description: none


Gene families : OG0000556 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000556_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g12926
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
Aob_g09047 No alias Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene71848.t2 Aspi01Gene71848 Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g08329 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Gb_32610 No alias transcription factor (Trihelix) 0.03 OrthoFinder output from all 47 species
Msp_g47167 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g22839 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
InterPro domains Description Start Stop
IPR044822 Myb_DNA-bind_4 452 539
IPR044822 Myb_DNA-bind_4 162 227
No external refs found!