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  5. Aop_g11615

Aop_g11615


Description : EC_6.1 ligase forming carbon-oxygen bond & original description: none


Gene families : OG0003763 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003763_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g11615
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
Dcu_g14826 No alias EC_6.1 ligase forming carbon-oxygen bond & original... 0.03 OrthoFinder output from all 47 species
Lfl_g06099 No alias EC_6.1 ligase forming carbon-oxygen bond & original... 0.03 OrthoFinder output from all 47 species
Nbi_g05312 No alias EC_6.1 ligase forming carbon-oxygen bond & original... 0.03 OrthoFinder output from all 47 species
Pir_g07102 No alias EC_6.1 ligase forming carbon-oxygen bond & original... 0.02 OrthoFinder output from all 47 species
Pp3c3_17030V3.1 Pp3c3_17030 seryl-tRNA synthetase / serine--tRNA ligase 0.01 OrthoFinder output from all 47 species
Spa_g10648 No alias EC_6.1 ligase forming carbon-oxygen bond & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0004812 aminoacyl-tRNA ligase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006418 tRNA aminoacylation for protein translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005747 mitochondrial respiratory chain complex I IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0016485 protein processing IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
CC GO:0017053 transcription repressor complex IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
CC GO:0030964 NADH dehydrogenase complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0043085 positive regulation of catalytic activity IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0044093 positive regulation of molecular function IEP HCCA
CC GO:0045271 respiratory chain complex I IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
CC GO:1902495 transmembrane transporter complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
CC GO:1990351 transporter complex IEP HCCA
InterPro domains Description Start Stop
IPR002314 aa-tRNA-synt_IIb 228 415
IPR015866 Ser-tRNA-synth_1_N 1 119
No external refs found!