Aop_g11527 (VAC1, ECB2, ATECB2)

Aliases : VAC1, ECB2, ATECB2

Description : not classified & original description: none

Gene families : OG0021935 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0021935_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aop_g11527
Cluster	HCCA: Cluster_45

Target	Alias	Description	ECC score	Gene Family Method
Als_g13898	VAC1, ECB2, ATECB2	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g13881	VAC1, ECB2, ATECB2	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g18576	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	HCCA
BP	GO:0006399	tRNA metabolic process	IEP	HCCA
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	HCCA
BP	GO:0043038	amino acid activation	IEP	HCCA
BP	GO:0043039	tRNA aminoacylation	IEP	HCCA
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR046848	E_motif	781	824
IPR002885	Pentatricopeptide_repeat	565	595
IPR002885	Pentatricopeptide_repeat	436	457
IPR002885	Pentatricopeptide_repeat	335	358
IPR002885	Pentatricopeptide_repeat	637	662
IPR002885	Pentatricopeptide_repeat	738	761
IPR002885	Pentatricopeptide_repeat	161	205
IPR002885	Pentatricopeptide_repeat	361	409
IPR002885	Pentatricopeptide_repeat	663	709
IPR002885	Pentatricopeptide_repeat	462	508
IPR002885	Pentatricopeptide_repeat	259	306

External Links

No external refs found!