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  5. Aop_g07567

Aop_g07567 (CLPB3, CLPB-P, APG6)


Aliases : CLPB3, CLPB-P, APG6

Description : organellar chaperone *(Clp-p/Clp-m) & original description: none


Gene families : OG0000193 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000193_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g07567

Target Alias Description ECC score Gene Family Method Actions
AT3G48870 HSP93-III,... Clp ATPase 0.03 OrthoFinder output from all 47 species
Adi_g001206 ATHSP101, HOT1, HSP101 cytosolic chaperone *(Hsp101) & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g058441 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.03 OrthoFinder output from all 47 species
Cba_g02511 HSP93-V, DCA1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05307 CLPB3, CLPB-P, APG6 organellar chaperone *(Clp-p/Clp-m) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20352 HSP93-V, DCA1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g20889 CLPB3, CLPB-P, APG6 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25408 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.03 OrthoFinder output from all 47 species
Len_g34142 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.02 OrthoFinder output from all 47 species
MA_8475g0010 ATHSP101, HOT1, HSP101 Chaperone protein ClpB1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Nbi_g11478 HSP93-V, DCA1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g05832 CLPB3, CLPB-P, APG6 organellar chaperone *(Clp-p/Clp-m) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g19463 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.03 OrthoFinder output from all 47 species
Ppi_g43633 ATHSP101, HOT1, HSP101 cytosolic chaperone *(Hsp101) & original description: none 0.03 OrthoFinder output from all 47 species
Smo133845 SAG15, CLPD, ERD1 Chaperone protein ClpD1, chloroplastic OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Spa_g18708 CLPB3, CLPB-P, APG6 organellar chaperone *(Clp-p/Clp-m) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g21408 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.02 OrthoFinder output from all 47 species
Spa_g23892 SAG15, CLPD, ERD1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g45039 ATHSP101, HOT1, HSP101 cytosolic chaperone *(Hsp101) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000347 THO complex IEP HCCA
CC GO:0000445 THO complex part of transcription export complex IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 240 370
IPR041546 ClpA/ClpB_AAA_lid 378 480
IPR004176 Clp_R_dom 56 105
IPR004176 Clp_R_dom 130 181
IPR019489 Clp_ATPase_C 813 891
IPR003959 ATPase_AAA_core 636 806
No external refs found!