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  5. Aop_g06832

Aop_g06832 (RABF2B, ATRAB-F2B,...)


Aliases : RABF2B, ATRAB-F2B, RAB-F2B, ATRABF2B, ARA7, ARA-7, ATRAB5B

Description : vesicle tethering small GTPase *(RAB5) & original description: none


Gene families : OG0001928 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001928_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g06832

Target Alias Description ECC score Gene Family Method Actions
Adi_g082868 RABF2B,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000498.87 RABF2B,... Ras-related protein RABF2b OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
LOC_Os03g46390.1 RABF2B,... F-class RAB GTPase 0.02 OrthoFinder output from all 47 species
Len_g37845 RABF2B,... vesicle tethering small GTPase *(RAB5) & original... 0.03 OrthoFinder output from all 47 species
Spa_g16229 RABF2B,... vesicle tethering small GTPase *(RAB5) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008175 tRNA methyltransferase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
CC GO:0016272 prefoldin complex IEP HCCA
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0061650 ubiquitin-like protein conjugating enzyme activity IEP HCCA
MF GO:0061657 UFM1 conjugating enzyme activity IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0071568 UFM1 transferase activity IEP HCCA
BP GO:0071569 protein ufmylation IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR001806 Small_GTPase 12 171
No external refs found!