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  5. Aop_g05888

Aop_g05888 (AR192)


Aliases : AR192

Description : nucleotide exchange factor *(MGE) & original description: none


Gene families : OG0002139 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002139_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g05888

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00192450 AR192,... GrpE protein homolog 2, mitochondrial OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Adi_g099771 No alias nucleotide exchange factor *(MGE) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g113179 AR192 nucleotide exchange factor *(MGE) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.08G064400.1 Ceric.08G064400 nucleotide exchange factor *(MGE) & original... 0.03 OrthoFinder output from all 47 species
Ceric.34G002300.1 AR192, Ceric.34G002300 nucleotide exchange factor *(MGE) & original... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001086.6 AR192 GrpE protein homolog 2, mitochondrial OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
MA_315276g0010 AR192 nucleotide exchange factor (MGE) 0.02 OrthoFinder output from all 47 species
Msp_g10882 AR192 nucleotide exchange factor *(MGE) & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g32166 AR192 nucleotide exchange factor *(MGE) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g11640 AR192 nucleotide exchange factor *(MGE) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g39029 No alias nucleotide exchange factor *(MGE) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEA Interproscan
BP GO:0006457 protein folding IEA Interproscan
MF GO:0042803 protein homodimerization activity IEA Interproscan
MF GO:0051087 chaperone binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR000740 GrpE 112 286
No external refs found!