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  5. Aop_g05374

Aop_g05374 (ATCBP80, ABH1, ENS, CBP80)


Aliases : ATCBP80, ABH1, ENS, CBP80

Description : component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex & original description: none


Gene families : OG0004633 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004633_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g05374

Target Alias Description ECC score Gene Family Method Actions
Ala_g18568 ATCBP80, ABH1, ENS, CBP80 component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex... 0.03 OrthoFinder output from all 47 species
Azfi_s2015.g108704 ATCBP80, ABH1, ENS, CBP80 component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021589.24 ATCBP80, ABH1, ENS, CBP80 RNA processing.RNA 5-end cap adding.CBP80-CBP20 mRNA... 0.01 OrthoFinder output from all 47 species
Cre12.g524100 No alias RNA processing.RNA 5-end cap adding.CBP80-CBP20 mRNA... 0.01 OrthoFinder output from all 47 species
GSVIVT01037230001 ATCBP80, ABH1, ENS, CBP80 RNA processing.RNA 5-end cap adding.CBP80-CBP20 mRNA... 0.02 OrthoFinder output from all 47 species
LOC_Os03g22570.1 ATCBP80, ABH1,... component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex (CBC) 0.03 OrthoFinder output from all 47 species
Mp1g05560.1 ATCBP80, ABH1, ENS, CBP80 component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex (CBC) 0.03 OrthoFinder output from all 47 species
Pir_g36866 ATCBP80, ABH1, ENS, CBP80 component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex... 0.03 OrthoFinder output from all 47 species
Sam_g12525 No alias component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex... 0.02 OrthoFinder output from all 47 species
Sam_g28009 No alias component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex... 0.03 OrthoFinder output from all 47 species
Smo115849 ATCBP80, ABH1, ENS, CBP80 RNA processing.RNA 5-end cap adding.CBP80-CBP20 mRNA... 0.04 OrthoFinder output from all 47 species
Spa_g26897 ATCBP80, ABH1, ENS, CBP80 component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex... 0.03 OrthoFinder output from all 47 species
Zm00001e001643_P004 ATCBP80, ABH1,... component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex (CBC) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043085 positive regulation of catalytic activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0044093 positive regulation of molecular function IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR015172 MIF4G-like_typ-1 335 460
IPR015174 MIF4G-like_typ-2 495 808
IPR003890 MIF4G-like_typ-3 36 200
No external refs found!