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  5. Aop_g04877

Aop_g04877


Description : not classified & original description: none


Gene families : OG0008626 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008626_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g04877

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00260200 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT1G12800 No alias Nucleic acid-binding, OB-fold-like protein 0.02 OrthoFinder output from all 47 species
Adi_g058535 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g12369 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g03977 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g16052 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene43677.t2 Aspi01Gene43677 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.34G040000.1 Ceric.34G040000 not classified & original description: pacid=50623148... 0.06 OrthoFinder output from all 47 species
Dac_g13586 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g09585 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g11903 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01019806001 No alias No description available 0.06 OrthoFinder output from all 47 species
LOC_Os02g02390.1 LOC_Os02g02390 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Lfl_g04234 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Mp2g11640.1 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Nbi_g05908 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g33654 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0068.g016351 No alias delta-12/delta-15 fatty acid desaturase & original... 0.06 OrthoFinder output from all 47 species
Sam_g17254 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Solyc08g007950.3.1 Solyc08g007950 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g12402 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g09536 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e013455_P001 Zm00001e013455 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0010564 regulation of cell cycle process IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0032954 regulation of cytokinetic process IEP HCCA
BP GO:0032955 regulation of division septum assembly IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044087 regulation of cellular component biogenesis IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0051301 cell division IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901891 regulation of cell septum assembly IEP HCCA
InterPro domains Description Start Stop
IPR003029 S1_domain 1038 1109
No external refs found!