Aop_g01020

Description : not classified & original description: none

Gene families : OG0000926 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000926_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aop_g01020

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00062p00098880	evm_27.TU.AmTr_v1...	Protein biosynthesis.organelle translation...	0.04	OrthoFinder output from all 47 species
AMTR_s00065p00169990	evm_27.TU.AmTr_v1...	Protein biosynthesis.organelle translation...	0.02	OrthoFinder output from all 47 species
AT1G70190	No alias	Ribosomal protein L7/L12, oligomerisation;Ribosomal...	0.04	OrthoFinder output from all 47 species
AT3G06040	No alias	Ribosomal protein L12/ ATP-dependent Clp protease...	0.03	OrthoFinder output from all 47 species
AT4G36420	No alias	Ribosomal protein L12 family protein	0.09	OrthoFinder output from all 47 species
AT4G37660	No alias	Ribosomal protein L12/ ATP-dependent Clp protease...	0.15	OrthoFinder output from all 47 species
Als_g19876	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Als_g22832	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Azfi_s0331.g065406	No alias	not classified & original description: CDS=1-612	0.05	OrthoFinder output from all 47 species
Cba_g11519	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ceric.34G065900.1	Ceric.34G065900	not classified & original description: pacid=50622739...	0.05	OrthoFinder output from all 47 species
Dac_g05009	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Dcu_g00728	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Gb_16973	No alias	component mtRPL7/L12 of large ribosomal subunit proteome	0.03	OrthoFinder output from all 47 species
Gb_26365	No alias	component mtRPL7/L12 of large ribosomal subunit proteome	0.03	OrthoFinder output from all 47 species
Lfl_g03909	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
MA_137800g0010	No alias	component mtRPL7/L12 of large ribosomal subunit proteome	0.09	OrthoFinder output from all 47 species
Pir_g12392	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g20259	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g18974	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g25874	No alias	component *(bL12m) of large mitoribosomal-subunit...	0.02	OrthoFinder output from all 47 species
Sam_g25875	No alias	component *(bL12m) of large mitoribosomal-subunit...	0.05	OrthoFinder output from all 47 species
Sam_g27095	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Solyc02g031970.1.1	Solyc02g031970	component mtRPL7/L12 of large ribosomal subunit proteome	0.03	OrthoFinder output from all 47 species
Solyc02g088760.2.1	Solyc02g088760	component mtRPL7/L12 of large ribosomal subunit proteome	0.02	OrthoFinder output from all 47 species
Solyc02g092300.1.1	Solyc02g092300	component mtRPL7/L12 of large ribosomal subunit proteome	0.03	OrthoFinder output from all 47 species
Solyc09g010030.3.1	Solyc09g010030	component mtRPL7/L12 of large ribosomal subunit proteome	0.05	OrthoFinder output from all 47 species
Zm00001e025012_P001	Zm00001e025012	component mtRPL7/L12 of large ribosomal subunit proteome	0.02	OrthoFinder output from all 47 species
Zm00001e026468_P001	Zm00001e026468	component mtRPL7/L12 of large ribosomal subunit proteome	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
MF	GO:0003743	translation initiation factor activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
CC	GO:0005737	cytoplasm	IEP	HCCA
CC	GO:0005852	eukaryotic translation initiation factor 3 complex	IEP	HCCA
BP	GO:0006457	protein folding	IEP	HCCA
MF	GO:0008135	translation factor activity, RNA binding	IEP	HCCA
MF	GO:0016462	pyrophosphatase activity	IEP	HCCA
MF	GO:0016746	acyltransferase activity	IEP	HCCA
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	HCCA
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	HCCA
MF	GO:0016887	ATP hydrolysis activity	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
MF	GO:0044183	protein folding chaperone	IEP	HCCA
MF	GO:0045182	translation regulator activity	IEP	HCCA
MF	GO:0051082	unfolded protein binding	IEP	HCCA
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
MF	GO:0140657	ATP-dependent activity	IEP	HCCA
MF	GO:0140662	ATP-dependent protein folding chaperone	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR008932	Ribosomal_L7/L12_oligo	105	151
IPR013823	Ribosomal_L7/L12_C	171	235

External Links

No external refs found!

Aop_g01020

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation