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  5. Lfl_g07759

Lfl_g07759 (COB)


Aliases : COB

Description : regulatory protein *(COB) of cellulose-hemicellulose network assembly & original description: none


Gene families : OG0000498 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000498_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g07759

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00228050 COBL1,... Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.03 OrthoFinder output from all 47 species
AMTR_s00047p00216570 IRX6, COBL4,... Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.03 OrthoFinder output from all 47 species
AMTR_s00066p00182490 COBL10,... Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.02 OrthoFinder output from all 47 species
AT3G20580 COBL10 COBRA-like protein 10 precursor 0.03 OrthoFinder output from all 47 species
AT4G27110 COBL11 COBRA-like protein 11 precursor 0.03 OrthoFinder output from all 47 species
AT5G15630 IRX6, COBL4 COBRA-like extracellular glycosyl-phosphatidyl... 0.07 OrthoFinder output from all 47 species
AT5G60920 COB COBRA-like extracellular glycosyl-phosphatidyl... 0.1 OrthoFinder output from all 47 species
Adi_g082871 COB regulatory protein *(COB) of cellulose-hemicellulose... 0.04 OrthoFinder output from all 47 species
Aev_g02340 COB regulatory protein *(COB) of cellulose-hemicellulose... 0.03 OrthoFinder output from all 47 species
Aev_g17419 COB regulatory protein *(COB) of cellulose-hemicellulose... 0.05 OrthoFinder output from all 47 species
Ala_g14783 COB regulatory protein *(COB) of cellulose-hemicellulose... 0.09 OrthoFinder output from all 47 species
Als_g15085 COBL2 regulatory protein *(COB) of cellulose-hemicellulose... 0.05 OrthoFinder output from all 47 species
Aob_g14283 COB regulatory protein *(COB) of cellulose-hemicellulose... 0.05 OrthoFinder output from all 47 species
Aop_g12365 COB regulatory protein *(COB) of cellulose-hemicellulose... 0.09 OrthoFinder output from all 47 species
Aop_g18626 COBL2 regulatory protein *(COB) of cellulose-hemicellulose... 0.03 OrthoFinder output from all 47 species
Aspi01Gene68529.t1 COBL2, Aspi01Gene68529 regulatory protein *(COB) of cellulose-hemicellulose... 0.04 OrthoFinder output from all 47 species
Ceric.16G001100.1 COB, Ceric.16G001100 regulatory protein *(COB) of cellulose-hemicellulose... 0.06 OrthoFinder output from all 47 species
Dac_g15805 COBL1 regulatory protein *(COB) of cellulose-hemicellulose... 0.08 OrthoFinder output from all 47 species
Dcu_g01030 COB regulatory protein *(COB) of cellulose-hemicellulose... 0.07 OrthoFinder output from all 47 species
Dde_g26915 COBL1 regulatory protein *(COB) of cellulose-hemicellulose... 0.07 OrthoFinder output from all 47 species
Ehy_g05951 COB regulatory protein *(COB) of cellulose-hemicellulose... 0.04 OrthoFinder output from all 47 species
Ehy_g12791 COB regulatory protein *(COB) of cellulose-hemicellulose... 0.02 OrthoFinder output from all 47 species
GSVIVT01008129001 IRX6, COBL4 Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.05 OrthoFinder output from all 47 species
GSVIVT01012641001 COBL10 Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.03 OrthoFinder output from all 47 species
GSVIVT01036565001 IRX6, COBL4 Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.04 OrthoFinder output from all 47 species
Gb_36719 IRX6, COBL4 COB cellulose microfibrils and hemicellulose interaction protein 0.09 OrthoFinder output from all 47 species
Gb_36720 COB COB cellulose microfibrils and hemicellulose interaction protein 0.03 OrthoFinder output from all 47 species
LOC_Os03g18910.1 SEB1, COBL7,... COB cellulose microfibrils and hemicellulose interaction protein 0.02 OrthoFinder output from all 47 species
LOC_Os03g30250.1 IRX6, COBL4,... COB cellulose microfibrils and hemicellulose interaction protein 0.03 OrthoFinder output from all 47 species
LOC_Os03g30260.1 COBL1, LOC_Os03g30260 COB cellulose microfibrils and hemicellulose interaction protein 0.03 OrthoFinder output from all 47 species
LOC_Os03g54750.1 COB, LOC_Os03g54750 COB cellulose microfibrils and hemicellulose interaction protein 0.09 OrthoFinder output from all 47 species
LOC_Os05g32110.1 COB, LOC_Os05g32110 COB cellulose microfibrils and hemicellulose interaction protein 0.08 OrthoFinder output from all 47 species
LOC_Os06g47110.1 COBL10, LOC_Os06g47110 COB cellulose microfibrils and hemicellulose interaction protein 0.03 OrthoFinder output from all 47 species
Len_g16254 COBL2 regulatory protein *(COB) of cellulose-hemicellulose... 0.08 OrthoFinder output from all 47 species
MA_106654g0010 COB COB cellulose microfibrils and hemicellulose interaction protein 0.04 OrthoFinder output from all 47 species
MA_4056g0010 COB COB cellulose microfibrils and hemicellulose interaction protein 0.05 OrthoFinder output from all 47 species
MA_637485g0010 IRX6, COBL4 COB cellulose microfibrils and hemicellulose interaction protein 0.05 OrthoFinder output from all 47 species
Mp7g06600.1 COBL1 COB cellulose microfibrils and hemicellulose interaction protein 0.03 OrthoFinder output from all 47 species
Msp_g26241 COB regulatory protein *(COB) of cellulose-hemicellulose... 0.06 OrthoFinder output from all 47 species
Nbi_g08845 COBL1 regulatory protein *(COB) of cellulose-hemicellulose... 0.13 OrthoFinder output from all 47 species
Ore_g28352 COBL2 regulatory protein *(COB) of cellulose-hemicellulose... 0.07 OrthoFinder output from all 47 species
Pnu_g12421 COB regulatory protein *(COB) of cellulose-hemicellulose... 0.04 OrthoFinder output from all 47 species
Ppi_g06855 COBL1 regulatory protein *(COB) of cellulose-hemicellulose... 0.06 OrthoFinder output from all 47 species
Smo271954 COBL1 Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.06 OrthoFinder output from all 47 species
Solyc01g065530.3.1 SEB1, COBL7,... COB cellulose microfibrils and hemicellulose interaction protein 0.02 OrthoFinder output from all 47 species
Solyc02g065765.1.1 COB, Solyc02g065765 COB cellulose microfibrils and hemicellulose interaction protein 0.08 OrthoFinder output from all 47 species
Solyc02g089130.4.1 IRX6, COBL4,... COB cellulose microfibrils and hemicellulose interaction protein 0.03 OrthoFinder output from all 47 species
Solyc03g070440.4.1 IRX6, COBL4,... COB cellulose microfibrils and hemicellulose interaction protein 0.04 OrthoFinder output from all 47 species
Solyc03g114900.3.1 IRX6, COBL4,... COB cellulose microfibrils and hemicellulose interaction protein 0.06 OrthoFinder output from all 47 species
Solyc03g114910.4.1 COB, Solyc03g114910 COB cellulose microfibrils and hemicellulose interaction protein 0.03 OrthoFinder output from all 47 species
Spa_g13676 COBL1 regulatory protein *(COB) of cellulose-hemicellulose... 0.07 OrthoFinder output from all 47 species
Spa_g24271 COBL1 regulatory protein *(COB) of cellulose-hemicellulose... 0.09 OrthoFinder output from all 47 species
Tin_g12333 COBL1 regulatory protein *(COB) of cellulose-hemicellulose... 0.05 OrthoFinder output from all 47 species
Zm00001e001386_P001 SEB1, COBL7,... COB cellulose microfibrils and hemicellulose interaction protein 0.02 OrthoFinder output from all 47 species
Zm00001e012022_P001 COB, Zm00001e012022 COB cellulose microfibrils and hemicellulose interaction protein 0.03 OrthoFinder output from all 47 species
Zm00001e035505_P001 IRX6, COBL4,... COB cellulose microfibrils and hemicellulose interaction protein 0.02 OrthoFinder output from all 47 species
Zm00001e038043_P001 IRX6, COBL4,... COB cellulose microfibrils and hemicellulose interaction protein 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0010215 cellulose microfibril organization IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006918 COBRA_pln 60 223
No external refs found!