1. Home
  2. Species
  3. Lygodium flexuosum
  4. Sequence
  5. Lfl_g07445

Lfl_g07445


Description : susceptibility factor *(EXA1) & original description: none


Gene families : OG0000708 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000708_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g07445
Cluster HCCA: Cluster_144

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00074580 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT1G24300 No alias GYF domain-containing protein 0.09 OrthoFinder output from all 47 species
AT1G27430 No alias GYF domain-containing protein 0.09 OrthoFinder output from all 47 species
Adi_g041269 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g055823 No alias susceptibility factor *(EXA1) & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g09024 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g17669 No alias susceptibility factor *(EXA1) & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g37682 No alias susceptibility factor *(EXA1) & original description: none 0.05 OrthoFinder output from all 47 species
Als_g14645 No alias susceptibility factor *(EXA1) & original description: none 0.08 OrthoFinder output from all 47 species
Als_g18795 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g22450 No alias susceptibility factor *(EXA1) & original description: none 0.07 OrthoFinder output from all 47 species
Als_g31508 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55227 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g17703 No alias susceptibility factor *(EXA1) & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g08149 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g70568 No alias susceptibility factor *(EXA1) & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene64000.t1 Aspi01Gene64000 susceptibility factor *(EXA1) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0013.g013373 No alias susceptibility factor *(EXA1) & original description: CDS=1-3141 0.05 OrthoFinder output from all 47 species
Azfi_s0013.g013375 No alias not classified & original description: CDS=187-2031 0.03 OrthoFinder output from all 47 species
Azfi_s0052.g031617 No alias not classified & original description: CDS=1-4227 0.05 OrthoFinder output from all 47 species
Azfi_s0073.g037093 No alias not classified & original description: CDS=389-5539 0.03 OrthoFinder output from all 47 species
Azfi_s0448.g070692 No alias susceptibility factor *(EXA1) & original description:... 0.04 OrthoFinder output from all 47 species
Cba_g07184 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g29387 No alias susceptibility factor *(EXA1) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.18G008600.1 Ceric.18G008600 susceptibility factor *(EXA1) & original description:... 0.07 OrthoFinder output from all 47 species
Ceric.18G048100.1 Ceric.18G048100 susceptibility factor *(EXA1) & original description:... 0.12 OrthoFinder output from all 47 species
Ceric.33G057600.1 Ceric.33G057600 susceptibility factor *(EXA1) & original description:... 0.08 OrthoFinder output from all 47 species
Dac_g04272 No alias susceptibility factor *(EXA1) & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g12629 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g05846 No alias susceptibility factor *(EXA1) & original description: none 0.09 OrthoFinder output from all 47 species
Dcu_g39021 No alias susceptibility factor *(EXA1) & original description: none 0.09 OrthoFinder output from all 47 species
Dde_g22181 No alias susceptibility factor *(EXA1) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g05076 No alias susceptibility factor *(EXA1) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15753 No alias susceptibility factor *(EXA1) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g21462 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01000921001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01000922001 No alias No description available 0.13 OrthoFinder output from all 47 species
GSVIVT01009695001 No alias No description available 0.08 OrthoFinder output from all 47 species
GSVIVT01033051001 No alias No description available 0.09 OrthoFinder output from all 47 species
LOC_Os01g69990.1 LOC_Os01g69990 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Len_g14158 No alias susceptibility factor *(EXA1) & original description: none 0.11 OrthoFinder output from all 47 species
Len_g20603 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g58877 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10117g0030 No alias no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
MA_10117g0040 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10425836g0010 No alias susceptibility factor (EXA1) 0.06 OrthoFinder output from all 47 species
MA_10425836g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp8g07340.1 No alias susceptibility factor (EXA1) 0.03 OrthoFinder output from all 47 species
Msp_g20541 No alias susceptibility factor *(EXA1) & original description: none 0.08 OrthoFinder output from all 47 species
Msp_g32509 No alias susceptibility factor *(EXA1) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g44868 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g03874 No alias susceptibility factor *(EXA1) & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g05488 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g20345 No alias susceptibility factor *(EXA1) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g06775 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g13051 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g16118 No alias susceptibility factor *(EXA1) & original description: none 0.11 OrthoFinder output from all 47 species
Ore_g23409 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g23458 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g19486 No alias susceptibility factor *(EXA1) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g19518 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g46347 No alias susceptibility factor *(EXA1) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g54992 No alias susceptibility factor *(EXA1) & original description: none 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0164.g024075 No alias susceptibility factor *(EXA1) & original description: CDS=1-5616 0.07 OrthoFinder output from all 47 species
Sam_g11581 No alias susceptibility factor *(EXA1) & original description: none 0.07 OrthoFinder output from all 47 species
Sam_g24517 No alias susceptibility factor *(EXA1) & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g29247 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Smo438556 No alias No description available 0.05 OrthoFinder output from all 47 species
Smo438614 No alias No description available 0.11 OrthoFinder output from all 47 species
Solyc04g080240.4.1 Solyc04g080240 susceptibility factor (EXA1) 0.06 OrthoFinder output from all 47 species
Solyc05g015920.3.1 Solyc05g015920 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc05g015930.4.1 Solyc05g015930 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Spa_g08452 No alias susceptibility factor *(EXA1) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14135 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30700 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g46291 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g55090 No alias susceptibility factor *(EXA1) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g08422 No alias susceptibility factor *(EXA1) & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g17159 No alias susceptibility factor *(EXA1) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g35687 No alias susceptibility factor *(EXA1) & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e028423_P003 Zm00001e028423 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
Zm00001e028424_P001 Zm00001e028424 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Zm00001e032780_P001 Zm00001e032780 susceptibility factor (EXA1) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0010921 regulation of phosphatase activity IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
BP GO:0019220 regulation of phosphate metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0019902 phosphatase binding IEP HCCA
MF GO:0019903 protein phosphatase binding IEP HCCA
BP GO:0030258 lipid modification IEP HCCA
BP GO:0030259 lipid glycosylation IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031399 regulation of protein modification process IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0035303 regulation of dephosphorylation IEP HCCA
BP GO:0035304 regulation of protein dephosphorylation IEP HCCA
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051174 regulation of phosphorus metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051336 regulation of hydrolase activity IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003169 GYF 608 652
No external refs found!