- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : CRR22
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00049p00220350 | OTP85,... | Pentatricopeptide repeat-containing protein At2g02980,... | 0.05 | OrthoFinder output from all 47 species | |
| AMTR_s00067p00084570 | evm_27.TU.AmTr_v1... | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g11535 | OSB1 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g15170 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aev_g37820 | OSB3 | ssDNA-binding protein *(OSB) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aev_g42385 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g42810 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g49640 | REME1 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ala_g31179 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g19086 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g03671 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aop_g16410 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Aop_g17427 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Aop_g19954 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g33058 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aop_g33229 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g36477 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g39230 | OTP84 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aspi01Gene02301.t1 | Aspi01Gene02301 | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene02316.t1 | Aspi01Gene02316 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene20358.t1 | Aspi01Gene20358 | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene22419.t1 | Aspi01Gene22419 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene25447.t1 | Aspi01Gene25447 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene26812.t1 | Aspi01Gene26812 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene34740.t1 | Aspi01Gene34740 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene34803.t1 | Aspi01Gene34803 | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene41775.t1 | Aspi01Gene41775 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene43949.t2 | OTP84, Aspi01Gene43949 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene55895.t1 | Aspi01Gene55895 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene58644.t1 | Aspi01Gene58644 | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Aspi01Gene67320.t1 | EMB2758, Aspi01Gene67320 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g06022 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g11852 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g20154 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g20517 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g20535 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g20670 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g20832 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g29842 | CRR2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g29976 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g31308 | REME1 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Cba_g34865 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g35117 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g44166 | OTP85 | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g74985 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g75329 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.21G004000.1 | Ceric.21G004000 | not classified & original description: pacid=50604228... | 0.06 | OrthoFinder output from all 47 species | |
| Dac_g12138 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dac_g16781 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g25154 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Dac_g33294 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g35515 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g08304 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Dcu_g37078 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g38468 | OTP86 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dde_g06719 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ehy_g29034 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os04g14130.1 | LOC_Os04g14130 | Pentatricopeptide repeat-containing protein At5g16860... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os09g24680.1 | LOC_Os09g24680 | Pentatricopeptide repeat-containing protein At1g74600,... | 0.06 | OrthoFinder output from all 47 species | |
| Lfl_g07412 | OTP86 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g04292 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g17695 | EMB2758 | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Msp_g17711 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g28474 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g30253 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g34204 | No alias | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Msp_g41395 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Msp_g46446 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Msp_g48712 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g06317 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g25474 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Ore_g03029 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g23526 | REME1 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g26217 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g33905 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Pir_g16520 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g23599 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Pnu_g30693 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pp3c17_4940V3.1 | Pp3c17_4940 | organellar single-stranded DNA binding protein 3 | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g05095 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0018.g007447 | No alias | not classified & original description: CDS=108-3026 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g33092 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Smo111982 | No alias | Pentatricopeptide repeat-containing protein At5g66520... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc07g005850.3.1 | Solyc07g005850 | Pentatricopeptide repeat-containing protein At4g30700... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| BP | GO:0006082 | organic acid metabolic process | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
| BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| BP | GO:0043436 | oxoacid metabolic process | IEP | HCCA |
| BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| No external refs found! |